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daninico.bsky.social
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New blog post: Build a local RAG application with Open WebUI to chat with your Zotero library doi.org/10.59350/gxv...

Safeguarding the future of biomedical science in the United States, by @nygenome.org Tom Maniatis www.cell.com/cell/fulltex...

Get in dorks, we're going protesting! STAND UP FOR SCIENCE WITH US ON MARCH 7TH, 2025 WASHINGTON DC AND EVERY STATE CAPITOL Because science is for everyone! Find us at www.standupforscience2025.org #standupforscience2025 #scienceforall #sciencenotsilence

Complex rearrangements fuel ER+ and HER2+ breast tumours www.nature.com/articles/s41...

Simply Statistics: Biologists, stop putting UMAP plots in your papers https://simplystatistics.org/posts/2024-12-23-biologists-stop-including-umap-plots-in-your-papers/ from @rafalab.bsky.social 🧬🖥️🧪

Biologist, stop putting UMAP plots in papers! Blogpost here: simplystatistics.org/posts/2024-1...

Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall genome.cshlp.org/content/earl...?

@elisabethbik.bsky.social Large Language Model Advanced Data Analysis Abuse to Create a Fake Data Set in Medical Research jamanetwork.com/journals/jam... The only way to combat this is to make _always_ a requirement to make the entire data publicly available

OpenAI’s Board Fires its High-Profile CEO, Sam Altman www.nytimes.com/2023/11/17/t...

After pulling out of Russia, Finnish pharmaceutical company Orion Pharma lost €25 million in annual profits. The company made several life-saving drugs, including treatment for rheumatoid arthritis. It reportedly sold off some trademark rights to Valenta Pharm & unspecified Russian entities.

Replicating scientific results is tough — but essential www.nature.com/articles/d41...

Interested in doing a PhD with me in Sweden? Experimental+computational genomics skills and/or interests? We have an open position! Great environment at KTH on @SciLifeLab campus, staff benefits, well-funded project, close interactions with our New York team. kth.varbi.com/en/what:job/...

Predicting tumour content of liquid biopsies from cell-free DNA bmcbioinformatics.biomedcentral.com/articles/10.... "statistical learning to predict tumour content from Fourier and wavelet transforms of cfDNA length distributions" Finally, stuff I studied 25 years ago prove useful for stuff I do now