jcamthrash.bsky.social - Profile | ThreadSky | a Reddit-style client for Bluesky

Our latest, lead by @ahoiching.bsky.social, uncovering physiological vulnerabilities and helping to explain growth rate limitation in SAR11. Cell cycle dysregulation of globally important SAR11 bacteria resulting from environmental perturbation www.biorxiv.org/content/10.1... #jcampubs

submitted 8 hours ago • 2 comments

Dynamics of microbial communities in Western Antarctic Peninsula waters shaped primarily by the biological interactions www.frontiersin.org/journals/mic... #jcampubs 🌊

submitted 8 hours ago • 0 comments

Stable microbial community promotes aerobic methanotrophy in a large river-reservoir system journals.asm.org/doi/full/10.... #jcampubs

submitted 8 hours ago • 0 comments

Hybridization capture sequencing for Vibrio spp. and associated virulence factors journals.asm.org/doi/full/10.... #jcampubs

submitted 8 hours ago • 0 comments

Cultivation of Methanonezhaarchaeia, the third class of methanogens within the phylum Thermoproteota www.biorxiv.org/content/10.1... #jcampubs

submitted 8 hours ago • 0 comments

Sulfide Oxidation Products Support Microbial Metabolism at Interface Environments in a Marine‐Like Serpentinizing Spring in Northern California onlinelibrary.wiley.com/doi/10.1111/... #jcampubs

submitted 9 hours ago • 0 comments

Cross-feeding and co-degradation within a bacterial consortium dominated by challenging-to-culture Leucobacter sp. HA-1 enhances sulfonamide degradation journals.asm.org/doi/full/10.... #jcampubs

submitted 1 day ago • 0 comments

Prolonged light exposure time enhances the photosynthetic investment in osmotrophic Ochromonas journals.asm.org/doi/full/10.... #jcampubs

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Virocell resource manipulation under nutrient limitation journals.asm.org/doi/full/10.... #jcampubs

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Giant viruses specific to deep oceans show persistent presence and activity www.biorxiv.org/content/10.1... #jcampubs 🌊

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Euktect: Enhanced Eukaryotic Sequence Detection and Classification in Metagenomes via the DNA Language Model www.biorxiv.org/content/10.1... #jcampubs

submitted 1 day ago • 0 comments

Dissolved oxygen and nitrates gradient influence marine microbial complexity and stability in Beibu Gulf www.frontiersin.org/journals/mic... #jcampubs 🌊

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Phytoplankton Exhibit Diverse Responses to Different Phases of Upwelling in the California Current System enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs 🌊

submitted 1 day ago • 0 comments

Microbial colonization and function of biofilms developing on plastics and bioplastics in a pristine mountain stream ecosystem aslopubs.onlinelibrary.wiley.com/doi/10.1002/... #jcampubs

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Human influence on climate detectable in the late 19th century www.pnas.org/doi/abs/10.1... #jcampubs

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A composite universal DNA signature for the tree of life www.nature.com/articles/s41... #jcampubs

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Volatilomic complexity of three Northern Greenland bacterial isolates across a salt gradient www.biorxiv.org/content/10.1... #jcampubs

submitted 2 days ago • 0 comments

Establishing Vibrio natriegens as a high-performance host for acetate-based poly-3-hydroxybutyrate production www.biorxiv.org/content/10.1... #jcampubs

submitted 2 days ago • 0 comments

Cross‐Shelf Transport of Organic Matter: A New Source of Fuel for the Existence of Intense Oxygen Minimum Zone in the Bay of Bengal agupubs.onlinelibrary.wiley.com/doi/10.1029/... #jcampubs 🌊

submitted 2 days ago • 0 comments

Metaproteomics-based stable isotope fingerprinting links intestinal bacteria to their carbon source and captures diet-induced substrate switching academic.oup.com/ismej/advanc... #jcampubs

submitted 2 days ago • 0 comments

Identification of key steps in the evolution of anaerobic methanotrophy in Candidatus Methanovorans (ANME-3) archaea www.science.org/doi/full/10.... #jcampubs

submitted 2 days ago • 0 comments

Identification of key bacteria for ecological dynamics in a coastal marine observatory www.biorxiv.org/content/10.1... #jcampubs

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Expanded Diversity of Microbial Groups Capable of Anaerobic Pyrite Reduction and Assimilation of Dissolution Products enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs

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Microbial Communities Drive Methane Fluxes From Floodplain Lakes—A Hydrological Gradient Perspective enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs

submitted 2 days ago • 0 comments

Linking Cell Size, Vmax and Km in Phototrophs and Chemotrophs: Insights From Bayesian Inference enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs

submitted 2 days ago • 0 comments

The Coastal Seafloor Microbiota Is Structured by Local Selection of Cosmopolitan Taxa enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs

submitted 2 days ago • 0 comments

Uncoupling growth and division in Chlamydomonas reinhardtii colonies: consistent cell cycle regulation under confinement academic.oup.com/ismecommun/a... #jcampubs

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If you're at #ASMicrobe, come see us today! I'm up at 8:15 in 403B, and our grad students: @oceancait.bsky.social at 9:15 in 403B and @astrobio-agb.bsky.social also at 9:15 in 402AB. I'll be scrambling between the two rooms to see them!

submitted 4 days ago • 1 comment

Hey #ASMicrobe 🦠 head over to the branch point biosciences booth to grab some swag likely inspired by @jcamthrash.bsky.social ‘s life. If you need QPCR assays, use them!

submitted 5 days ago • 1 comment

My talk at #ASMicrobe ! Looking forward to this!

submitted 5 days ago • 0 comments

For those at the #ASMicrobe @asm.org conference this weekend, my PhD student Alejandro De Santiago (a bioinformatics ninja) is presenting his poster on a new nematode-bacterial symbiosis we’ve recently discovered! TODAY in the poster hall www.abstractsonline.com/pp8/#!/20974...

submitted 6 days ago • 3 comments

KPop: accurate and scalable comparative analysis of microbial genomes by sequence embeddings genomebiology.biomedcentral.com/articles/10.... #jcampubs

submitted 6 days ago • 0 comments

Testing the priming effect in the deep ocean: are microbes too starved to consume recalcitrant organic carbon? www.biorxiv.org/content/10.1... #jcampubs 🌊

submitted 6 days ago • 0 comments

Small uncultured viral-like entities redraw the origin of viruses and cellular compartments www.biorxiv.org/content/10.1... #jcampubs

submitted 6 days ago • 0 comments

Genomic Personalities of Dehalococcoides Subspecies and Dehalogenimonas Illuminate Complete Trichloroethene Dechlorination in High-Salt Conditions academic.oup.com/ismecommun/a... #jcampubs

submitted 6 days ago • 0 comments

Coupling between bacterial phylogenetic diversity and heterotrophic productivity in a coastal ecosystem affected by estuarine plumes academic.oup.com/ismecommun/a... #jcampubs 🌊

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Defining ultra-slow-growing extremophilic microorganisms as aeonophiles #USC_earth #USC_MEB #jcampubs www.nature.com/articles/s41...

submitted 6 days ago • 0 comments

Guidelines for preventing and reporting contamination in low-biomass microbiome studies www.nature.com/articles/s41... #jcampubs

submitted 6 days ago • 0 comments

Cryptic cycling by electroactive bacterioplankton in Trout Bog Lake journals.asm.org/doi/full/10.... #jcampubs

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Quorum sensing modulates microbial community structure through regulation of secondary metabolites journals.asm.org/doi/full/10.... #jcampubs

submitted 6 days ago • 0 comments

Paramoeba atlantica as a Natural Intracellular Niche for Vibrios in Marine Ecosystems enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs

submitted 7 days ago • 0 comments

The Study of Microbial Physiology Under Microoxic Conditions Is Critical but Neglected enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs

submitted 7 days ago • 0 comments

Chromium‐Tanned Leather and Microbial Consortia: Identification of Taxa With Biodegradation Potential and Chromium Tolerance enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs

submitted 7 days ago • 1 comment

Denitrification genes in SAR11 confirmed with cultures and closed genomes! Denitrification genes in SAR11 and other ubiquitous lineages of marine bacteria isolated from the northern Benguela Upwelling System www.biorxiv.org/content/10.1... #jcampubs 🌊

submitted 7 days ago • 0 comments

Host Metabolite Production and Microbiome Dynamics: Effects of Long-Term Diatom Adaptation to Warming academic.oup.com/ismecommun/a... #jcampubs

submitted 7 days ago • 0 comments

Niche formation and metabolic interactions contribute to stable diversity in a spatially structured cyanobacterial community academic.oup.com/ismej/advanc... #jcampubs

submitted 7 days ago • 0 comments