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Breakthrough from Google DeepMind: AlphaGenome is Here 🧬

submitted 2 days ago • 2 comments

Interesting... but we need better data for this to work www.nature.com/articles/d41... #genomics #artificialintelligence #dna #bioinformatics

submitted 2 days ago • 0 comments

always always always run the sample data first when testing a new program #bioinformatics

submitted 25 days ago • 0 comments

It's great to see Windows Subsystem for Linux being open source by Microsoft! 🎉 I've been using WSL2 for my everyday Linux CLI tasks for Bioinformatics 🖥 🧬 – personally and professionally. #WSL #OpenSource #Microsoft #Linux #Development #Technology Blog Post: blogs.windows.com/windowsdevel...

submitted 38 days ago • 1 comment

Regeneron brought 23&Me customer data for $256M! 💰 This is HUGE for RWE data utilization, but will security & data privacy remain the same? 🤔 🧬 🖥 #Biotech #DataPrivacy #Investment #Healthcare #Technology Full press release: investor.regeneron.com/news-release...

submitted 39 days ago • 0 comments

🧪 The Arc Institute's Evo2 models DNA like an LLM models language, predicting mutations, gene function, and evolutionary signals. With 40B parameters trained on 128K genomes, it hints at AI-driven biological discovery. 🧬💻 #MLSky Link to the paper: https://arcinstitute.org/manuscripts/Evo2

submitted 123 days ago • 0 comments

This a very important topic considering recent sudden dissappearance of Atlas Biomed, continuing problems at 23andMe, acquisition of Ancestry by an investment firm Blackstone, & multiple security incidents. #genomics #healthinformation jamanetwork.com/journals/jam...

submitted 168 days ago • 0 comments

Accurate. #chemsky By instagram.com/nathanwpyles...

submitted 170 days ago • 7 comments

This is what I have added to my .bashrc file alias untar="tar xvf" alias untgz="tar xvzf" alias untargz="tar xvzf" alias unbz2="tar xvjf" #Linux #Bash #bioinformatics

submitted 180 days ago • 4 comments

Benchmarking AI Models for In Silico Gene Perturbation of Cells https://www.biorxiv.org/content/10.1101/2024.12.20.629581v1 🧬🖥️🧪

submitted 186 days ago • 0 comments

🎁 New RNA-Seq tutorial! Learn to run differential expression analysis with DESeq2, and create your own bioinformatics projects using public data and the Expression Atlas 🧬 🖥️ youtu.be/NGbZmlGLG5w

submitted 192 days ago • 1 comment

Put 👏🏼 the 👏🏼 sample 👏🏼 size 👏🏼 in 👏🏼 the 👏🏼 abstract 👏🏼

submitted 197 days ago • 26 comments

Friends don't let friends make bad graphs repo has been updated! Friends don't let friends use histogram for small sample sizes. Bin numbers affect the appearance of histograms, thus not robust to small (and modest sample sizes). They stabilize w/ large sample sizes. github.com/cxli233/Frie...

submitted 199 days ago • 1 comment

#Google just announced the Willow their new #quantumchips Can we expect a future where we will be doing seconds (yes, seconds) of MD Simulations using such quantum chips. . blog.google/technology/r... #drugdiscovery #mdsimulation #willow #quantumchip

submitted 200 days ago • 1 comment

Ok so this #deepvariant caller update from #google is BIG. github.com/google/deepv... - 1.6x time reduction (40% increase ??) - Pangenome integration - New model and improvements over previously model Excited to try this new update 🧬💻 #bioinformatics #wgs #ngs #variantcalling

submitted 201 days ago • 0 comments

New in @theinnovation.bsky.social! Thirteen years of clusterProfiler. This article provides a comprehensive review of the 13-year developmental trajectory of the research team in advancing #clusterProfiler. Read more doi.org/10.1016/j.xi... #bioinformatics #genomics #lifesciences

submitted 202 days ago • 0 comments

When you check on your cell culture after the weekend

submitted 208 days ago • 0 comments

Has #Bioinformatics usage in #genomics increased Patient's survival rate in #cancer ? AT SCALE Personalised Medicine is still #trending but I believe we will need more mass adoption with optimised cost to see it go mainstream. 🧬🖥

submitted 212 days ago • 0 comments

This is a sad state of Cancer treatment in India, where we already are struggling with the cures. Main stream public speakers are peddling pseudo-science. Irony is the patient herself is Dr. & went through rounds of modern treatment & chemotherapy.

submitted 216 days ago • 0 comments

What if we can store that Megabytes of data (0101) in those Megabases (ATGC) ? And then use this to train ourselves like a RAG for LLM technique to get better at things 🤔💭

submitted 218 days ago • 0 comments

www.nature.com/articles/d41...

submitted 219 days ago • 2 comments

TIL, logo for HOMER tool 🧬💻 is literally Homer Simpson🍩

submitted 219 days ago • 1 comment

Hello grch38/hg19 users, have a good day ! 🧬🖥

submitted 221 days ago • 1 comment

We strongly suggest that academic publishers and other platforms that host research rapidly implement a Share to Bluesky button for their articles. Here's how: docs.bsky.app/docs/advance... #AcademicSky #HigherEd #Altmetrics

submitted 221 days ago • 173 comments

Sandbox.bio is a neat resource for learning data wrangling for bioinformatics! The tutorials are straightforward and I’ve definitely used it here and there to brush up on my CLI skills 🤩 Have tutorial ideas? Check out their GitHub to learn how to contribute to the project 👩🏽‍💻 💻 🧬

submitted 223 days ago • 0 comments

New GPU-based MMseqs2: 20x faster searches on a single L40S (approx. as fast as a RTX 4090) vs. a 128-core CPU. This work enables to set up a very cost-efficient ColabFold MSA GPU server. 🧵🧵 📄 www.biorxiv.org/content/10.1... 💾 mmseqs.com 🗞️ developer.nvidia.com/blog/boost-a...

submitted 224 days ago • 2 comments