Finally we have a @GoogleColab notebook that can make the predictions including the activation analysis! (NOTE: model was only trained to return small-molecule binding sites. Support for protein-peptide/protein-protein coming soon.) https://colab.research.google.com/github/sokrypton/af2bind/blob/main/af2bind.ipynb (8/10)
Comments
(Prompt: protein structure drawn in cartoon mode colored in rainbow, surrounded by small molecules resembling amino acid sidechains colored grey)
Looks a little like spaghetti, 🍝 but given one of the coauthors is Italian, i figured... 😅 (10/10)