We (Chen Zhan!) just launched #sccomp for #Python!
Testing for differences in cell-type proportion in #singlecell #spatial data?
#sccomp is a mixed-effect Bayesian model
- Use sum-constrained BetaBinomial distribution
- Outliers detect.
- Remove unwanted effects
https://github.com/MangiolaLaboratory/sccompPy
Testing for differences in cell-type proportion in #singlecell #spatial data?
#sccomp is a mixed-effect Bayesian model
- Use sum-constrained BetaBinomial distribution
- Outliers detect.
- Remove unwanted effects
https://github.com/MangiolaLaboratory/sccompPy
Comments