Judith's magnum opus from her postdoc in our lab: a genome-integrated massively parallel reporter assay for quantitative insights into enhancer-promoter communication, AI benchmarking, variant dissection, & promoter motif characterization. It will be the foundation of her new lab @USC, Jan 2025! 🚀
Reposted from
Judith Kribelbauer
Finally out! We present EXTRA-seq, a new EXTended Reporter Assay to quantify endogenous enhancer-promoter communication at kb scale!
www.biorxiv.org/content/10.1...
A 🧵about what it can do:
#SynBio #DeepLearning #GeneRegulation
www.biorxiv.org/content/10.1...
A 🧵about what it can do:
#SynBio #DeepLearning #GeneRegulation
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