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dzunkovam.bsky.social
Microbial Single-Cell Genomics group leader at the Institute for Integrative Systems Biology I2SysBio @i2sysbio.bsky.social, University of Valencia @uv.es, interested in unknown microbes 🇸🇰🇨🇿🇪🇦🇦🇺🇺🇲🇪🇦 https://i2sysbio.es/groups/19 #single-cell #metagenomics
102 posts 1,260 followers 468 following
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University of Valencia @uv.es highlighted our Ecology and Evolution paper about the identification of the most optimal combination of tissue preservation and high molecular weight #DNA extraccion for #genome #sequencing of #nudibranchs 🪸🐙🦑 @i2sysbio.bsky.social

Congratulation to Gustavo Gómez, the director of the I2SysBio! His project Agrosensing got funded by #Impulsa-T program of @csic.es aimed to create spin-offs. His team will develop devices to detect in situ early signs of stress in #crops to improve production. #science #spinoff #plants 🧪🧬🖥️🌾

@ucciuv.bsky.social opens free registration for the 26th Evolution Morning, which will take place on Saturday 17 May in the Botanical Gardens in Valencia 🇪🇸. The event will feature presentations and a debate and is aimed at secondary school teachers. More info: 🌐 www.i2sysbio.es/communicatio... ⬇️

Delighted to be at the @pacbio.bsky.social #PRISM2025 meeting in Athens enjoying the latests developments and presenting at the Bioinformatics workshop our SQANTIverse @longtrec.bsky.social @bcbhubcsic.bsky.social

"Conèixer els màsters" is an informational event of the @uv.es 😀 Representing the Master's in Bioinformatics its director @vicentarnau.bsky.social and PhD student Celeste Moya attended. Registration for UV master's programs is open until June 13. Sign up now! @i2sysbio.bsky.social #bioinformatics

Researchers pinpoint the genes responsible for the final three pea traits studied by Gregor Mendel more than 160 years ago https://go.nature.com/3EC3eqT

Antibiotics are life-saving, but even short use can drive resistance in gut bacteria, with mutations lasting over a year, as seen here for ciprofloxacin. Antibiotic stewardship helps protect these powerful drugs for the future. #AMR #OneHealth #AntibioticResistance www.nature.com/articles/s41...

📰Nova publicació a Ecology and Evolution! Un equip del #CatBioGenome estudia com optimitzar la conservació i extracció d’ADN per a seqüenciació de lectura llarga a partir de nudibranquis 🐌🧬 @irbio-ub.bsky.social @ceabcsic.bsky.social @i2sysbio.bsky.social 👉 www.biogenoma.cat/nova-publica...

Detection of viral sequences at single-cell resolution identifies novel viruses associated with host gene expression changes - @lauraluebbert.com @lpachter.bsky.social go.nature.com/4lGrSY3

A huge, new resource for plasmid research - PlasmidScope is a database of 852,000 #plasmid sequences with a rich set of annotations, automated online analysis and interactive visualisation academic.oup.com/nar/article/...

🌎 Today is the #EarthDay! On 16th of April, the Sustainability Committees of @i2sysbio.bsky.social and @iatacsic.bsky.social organised a scientific conference entitled "How can your #science help sustainability?" showcasing our research on sustainability. More info: www.i2sysbio.es/communicatio...

We can celebrate the #EarthDay 🌍 with our paper contributing to the Earth Biogenome Project published in Ecology and Evolution! We aimed to identify the best DNA extraction protocol for long-read #sequencing of #nudibranch #genome ...⬇️ 🧬🖥️ 🦑🧪 🐟🪸 #MarineLife 🌐 onlinelibrary.wiley.com/doi/full/10....

Come to I2SysBio in Valencia for your Master degree! My colleague Tomas Matus @jtmatus.bsky.social offers topics related to genomes and transcriptional regulation of Cannabis sativa, Araucaria araucana, Vitis vinifera and diatoms #genomics #MSc #transcriptomics #plants #bioinformatics 🍇🌱🌾🧬🧪🖥

Congratulations, to my superproductive colleague Ana Conesa @anaconesa.bsky.social @conesalab.bsky.social 👏👏👏 After publishing a couple of Nature papers on long reads transcriptomics few weeks ago, she published other three papers in Genome Research today #bioinformatics #RNAseq 🧪🧬🖥 #womeninSTEM

Happy to share our work on jellyfish microbiomes across space and life history stages @akerwin.bsky.social #Microsky #Symbiosky 🧪🌊https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0319944&?utm_id=plos111&utm_source=internal&utm_medium=email&utm_campaign=author

Do not miss this essential summer school in long-read transcriptomics provided by specialized tool developers! www.earlham.ac.uk/events/long-... @pacbio.bsky.social @nanoporetech.com

📢 1 week left to submit your abstract for #ISMBECCB2025 to @hitseq.bsky.social !!!! Share your work & discover new algorithms and applications for sequencing data analysis!!!! 💽 🧬 🗓️ April 17, 2025 📥 Submit: www.iscb.org/ismbeccb2025... and select HitSeq! @bcbhubcsic.bsky.social @iscb.bsky.social

🚨 Abierta la preinscripción hasta el 29 de mayo para el Máster en Biología Sintética Integrativa, organizado por la UIMP y el @csic.es, con la participación del I2SysBio. 🧪 Una oportunidad única para formarte en biología sintética de vanguardia. www.i2sysbio.es/communicatio... #SyntheticBiology #MSc

🚀 Join the ATRAE BCBHub Programme at CSIC! 🚀 We’re looking for top-tier researchers in Computational Biology and Bioinformatics. 🔹 Webinars: April 7 (5 PM CET) & April 8 (9 AM CET) 🔹 Submit EoI by May 1 Full info shorturl.at/RmC2P #ResearchOpportunities #ComputationalBiology #Bioinformatics #CSIC

Manuel Ares Arroyo @aresarroyom.bsky.social from the Institut Pasteur in Paris @pasteur.fr visited our institute I2SysBio today. We enjoyed his talk about new perspectives in plasmid mobility and evolution #microsky 🧪🦠💻🧬

wow, telomeric transposons in bacteria with linear chromosomes! (of course this was first figured out in flies, inc by Bob Levis, who i was happy to see few days ago at the fly meeting). 🪰 www.science.org/doi/10.1126/... www.sciencedirect.com/science/arti... www.sciencedirect.com/science/arti...

It's finally out!!!! Our review on long-reads transcriptomics was published in @natrevgenet.bsky.social!! You can have a look at the paper here rdcu.be/efugl! We hope you like it 😀

I am so happy to see this manuscript finally out!!! We review and discuss all analysis steps in long reads transcriptomics. Hope the community finds this useful! Hugo thanks to @carolinamonzo.bsky.social and @tianyuanliu.bsky.social for the huge work!!! @longtrec.bsky.social @hitseq.bsky.social

The Conesa lab is on a roll! Another important paper for the field of Long-read Transcriptomics just published in Nature Reviews Genetics. Many interesting and helpful lessons for both beginner and experienced scientists alike. Congratulations to our brilliant #LongTREC authors!

📢 Jun Cheng and colleagues introduce NMRNet, a deep learning framework for predicting NMR chemical shifts. www.nature.com/articles/s43... #chemsky 🔓https://rdcu.be/efvfB

So proud to see @carolinamonzo.bsky.social publishing yet another fantastic paper about transcriptomics. Check out her review that has just been published in Nature Review Genetics ;-) shorturl.at/KeDAf

Congratulations to my colleagues Carolina Monzó @carolinamonzo.bsky.social, Tianyuan Liu & Ana Conesa @anaconesa.bsky.social for publication of their review on long-read transcriptomics in Nature Reviews Genetics @natrevgenet.bsky.social! Perfect source of information for my lectures #RNA-seq🧬🖥️👩‍🔬🧪

Esta semana es la Biophysics Week. Esta semana han hablado de ello en RNE: la Biophyzza Party!! www.rtve.es/play/audios/...

My colleagues from I2SysBio @i2sysbio.bsky.social Víctor Garrigós, Cecilia Picazo @cecipicam.bsky.social, Emilia Matallana @emiliamatallana.bsky.social and Agustin Aranda @mmolwineyeast.bsky.social published a paper about acetic acid metabolism and pH homeostasis in wine #yeasts! Congratulations!🧪🦠👩‍🔬

My colleague from I2SysBio @i2sysbio.bsky.social Javier Buceta @javierbuceta.bsky.social published a novel approach for 3D force and energy inference in curved epithelia. Stability can only be achieved if cells adopt the scutoid shape. Congratulations!🧪💻🧬 #scutoid #mathematics

March 24 is World Tuberculosis Day! Our Pathogenomics group @pathogenomics.bsky.social studies how different TB strains spread and trigger immune responses in human and bovine cells. Check out their video: www.youtube.com/shorts/eGNLL... 👩‍🔬🧪🦠 #microsky #tuberculosis @csic.es @paururo.bsky.social

A new Master in Microbiome Science 🦠🧫🔬👨‍🎓 👩‍🎓🧑‍🎓 @univie.ac.at Apply now! Registration till April 7th, 2025 studieren.univie.ac.at/en/degree-pr... #microbiome #master #uniwien #univienba #vienna #education #research #science #facts

Convocatoria JAE Intro @csic.es abierta! El @i2sysbio.bsky.social oferta 5 plazas para personas que tengan un grado en Ciencias durante 5 meses a media jornada. Ideales para estudiantes de máster en busca de un proyecto de iniciación a la investigación. Más info: sede.csic.gob.es/tramites/pro...

I'm happy to see the I2SysBio BlueSky community growing. Welcome, Alfred Fillol @alfredfisa.bsky.social , my new colleague, new PI at I2SysBio, who does superinteresting experiments to understand phage infections and spread of mobile genetic elements #viruses #phages #microsky #science 🧪🦠🧫🧬

My colleagues from I2SysBio @i2sysbio.bsky.social, Ana Conesa @anaconesa.bsky.social and Carolina Monzo @carolinamonzo.bsky.social, published an R package for simulating bulk and #singlecell data from #transcriptomics and #multiomics experiments. Congratulations! 👏 #bioinformatics 🖥🧬 #WomenInSTEM 👩‍🔬

My colleague Pilar Domingo-Calap @pilardomingoc.bsky.social from I2SysBio @i2sysbio.bsky.social got Women TechEU prize for the #phagetherapy implemented by her spin-off company Evolving Therapeutics. Congratulations 👏 #phages #microsky 🧫🦠🧪 #WomeninSTEM 👩‍🔬

Tercer día de la #2AsambleaBCBHub. Tenemos el honor de contar con Elena Cartea de @csic-vaact.bsky.social abriendo la jornada contandonos las iniciativas de @csic.es en Conexiones y PTIs.

The picture of the @bcbhubcsic.bsky.social, the Bioinformatics and Computational Biology family of @csic.es @csic-vaact.bsky.social @i2sysbio.bsky.social @ibv-csic.bsky.social @iscb.bsky.social

Our research institute celebrates the #Fallas festival in Valencia with the traditional churros & chocolate 🎆🥳

The International Society for Plasmid Biology and other Mobile Genetic Elements are finally in Bluesky!! 😎😎😎

Job offer at our research institute

Let's welcome Sari Gil @rogilgar.bsky.social, new on BlueSky! Deputy director of our institute @i2sysbio.bsky.social, known for her studies on the minimal bacterial #genome, #symbiosis of insects and #bacteria with ultrasmall genomes... and my mentor in university teaching #WomenInSTEM #microsky

🚨El I2SysBio participa en los eventos internacionales celebrando la 'Biophysics Week' con el ya tradicional BIOPHYZZA 🍕🍻 *El evento es gratuito pero hay que inscribirse!* research.uv.es/biophyzza/ @i2sysbio.bsky.social @ucciuv.bsky.social @biophysicalsoc.bsky.social Ayudanos a difundir ↩️🙏

#8M #WomeninSTEM #phagewomen #womeninscience

Congratulations to my colleague Tomas Matus @jtmatus.bsky.social from I2SysBio @i2sysbio.bsky.social ! His project #NutraSHIELD got funding from @interregeurope.bsky.social 🌱🧪

I had the honor to be member of the jury of PhD viva of Cristina Rusu. Industrial doctorate in #bioinformatics resulting from a collaboration of our institute @i2sysbio.bsky.social @uv.es with the biotech company Seqplexing, supervised by my colleague Vicente Arnau @vicentarnau.bsky.social 💻🧬👩‍🔬🧪

Postdoc opportunity at #EMBL @embl.org in #bioinformatics focused on analysis of the #TREC expedition data 🖥🧬🧫🦠🧪 #microsky