Profile avatar
amadeusine.bsky.social
Mt. 22.40 · biology, enzymes, membranes, machine learning, compilers + programming languages, optimisation & replication · etc. · mild clouds · usually forgetting something · ✨
2 posts 239 followers 0 following
Regular Contributor

A bit different #ArtAdventCalendar day 15. This time I made images in Python. It's Renzogram of atomic hydrogen (HI) in galaxy NGC1433 (left) and NGC6300 (right). Contours are colour-coded based on HI velocity - blue parts are moving towards us; red parts are moving away. #SciArt #RadioAstronomy 🔭

Long distance migrant (2022) This tiny tree swallow flies thousands of kilometres every spring to raise the next generation. No wonder he looks so serious #ArtAdventCalendar #photography #birds

Happy Sunday! Every once in awhile you get a bird that perches in the best place possible and poses for you! This beautiful Blue Jay let me get the most amazingly shallow depth-of-field and even showed off its vibrant blue wings!💙 Day 15 #artadventcalendar #birds #birdnerd #natureisbeautiful

We trained a model to co-generate protein sequence and structure by working in the ESMFold latent space, which encodes both. PLAID only requires sequences for training but generates all-atom structures! Really proud of @amyxlu.bsky.social 's effort leading this project end-to-end!

1/🧬 Excited to share PLAID, our new approach for co-generating sequence and all-atom protein structures by sampling from the latent space of ESMFold. This requires only sequences during training, which unlocks more data and annotations: bit.ly/plaid-proteins 🧵

Nitrogenase structural evolution across Earth’s history www.biorxiv.org/content/10.1... Huge paper in protein evolution!

Well I'm on BlueSky now! Were are all my bacterial outer membrane, antibiotics, protein folding people at?

Playing with mucins for #glycotime. Trajectory from @fionachembot.bsky.social and @rommieamaro.bsky.social #b3d #MolecularNodes #GeometryNodes #SciArt

Two BioML starter packs now: Pack 1: go.bsky.app/2VWBcCd Pack 2: go.bsky.app/Bw84Hmc DM if you want to be included (or nominate people who should be!)

I couldn't find one so I made one. Scientists who blend starter pack! Follow all the coolest #b3d science renders! I don't know everyone (or really anyone) so self-nominate and I'll add you in! (Bonus points if you post a cool render) go.bsky.app/S253qJN

NeurIPS Conference is now Live on Bluesky! -NeurIPS2024 Communication Chairs

"can you make a tutorial on–" see I would love to but I'm not the one steering this ship, I'm at the mercy of several obsessions in parallel, some of which escape confinement in public ways

今日のカワセミさん #野鳥 #birds

귀여운 넥타이를 한 스팍냥

暖色系の彩雲。