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Directing stem cell differentiation by chromatin state approximation https://www.biorxiv.org/content/10.1101/2025.04.24.650451v1

submitted 3 days ago • 0 comments

DNA Methylation Dynamics of Dose-dependent Acute Exercise, Training Adaptation, and Detraining https://www.biorxiv.org/content/10.1101/2025.04.22.650067v1

submitted 3 days ago • 0 comments

Chromosome-scale genome assembly of the European common cuttlefish Sepia officinalis https://www.biorxiv.org/content/10.1101/2025.04.22.649952v1

submitted 3 days ago • 0 comments

Advancing the understanding of the Bombyx mori genome through satellite DNA analysis: low strain differentiation and relationship with transposable elements https://www.biorxiv.org/content/10.1101/2025.04.21.649856v1

submitted 3 days ago • 0 comments

Transcription-based identification of uncharacterized genes in the human immune response https://www.biorxiv.org/content/10.1101/2025.04.22.646545v1

submitted 3 days ago • 0 comments

Genomic and Immunogenomic Profiling of Extramedullary Acute Myeloid Leukemia Reveals Actionable Clonal Branching and Frequent Immune Editing https://www.biorxiv.org/content/10.1101/2025.04.18.649610v1

submitted 4 days ago • 0 comments

A novel transgenic reporter to study vertebrate epigenetics https://www.biorxiv.org/content/10.1101/2025.04.21.649821v1

submitted 4 days ago • 0 comments

Evolutionary Consequences of Unusually Large Pericentric TE-rich Regions in the Genome of a Neotropical Fig Wasp https://www.biorxiv.org/content/10.1101/2025.04.20.649723v1

submitted 4 days ago • 0 comments

Cell type- and chromosome-specific chromatin landscapes and DNA replication programs of Drosophila testicular stem cells https://www.biorxiv.org/content/10.1101/2025.04.19.649648v1

submitted 4 days ago • 0 comments

Systematic cell-type resolved transcriptomes of 8 tissues in 8 lab and wild-derived mouse strains captures global and local expression variation https://www.biorxiv.org/content/10.1101/2025.04.21.649844v1

submitted 4 days ago • 0 comments

Tsbrowse: an interactive browser for Ancestral Recombination Graphs https://www.biorxiv.org/content/10.1101/2025.04.23.649987v1

submitted 4 days ago • 0 comments

Ecologically Significant Genetic Loci of P. allii: Contributions to Pathogenesis and Competition https://www.biorxiv.org/content/10.1101/2025.04.23.650278v1

submitted 4 days ago • 0 comments

Single-Cell Epigenomics Uncovers Heterochromatin Instability and Transcription Factor Dysfunction during Mouse Brain Aging https://www.biorxiv.org/content/10.1101/2025.04.21.649585v1

submitted 4 days ago • 0 comments

Azurify integrates cancer genomics with machine learning to classify the clinical significance of somatic variants https://www.biorxiv.org/content/10.1101/2025.04.18.649588v1

submitted 4 days ago • 0 comments

The ISW1 and CHD1 chromatin remodelers suppress global nucleosome dynamics in living yeast cells https://www.biorxiv.org/content/10.1101/2025.04.17.649351v1

submitted 4 days ago • 0 comments

The abundance of potential B12 producers in gut microbiome is inversely associated with serum vitamin B12 levels: A putative role of Host-microbiome feedback regulation https://www.biorxiv.org/content/10.1101/2025.04.21.649764v1

submitted 5 days ago • 0 comments

Genomics of freshwater adaptation in three-spine stickleback from eastern Canada https://www.biorxiv.org/content/10.1101/2025.04.18.649616v1

submitted 5 days ago • 0 comments

eDNA metabarcoding and whole genome sequencing detect European-American Eel hybrids in northeastern Canada https://www.biorxiv.org/content/10.1101/2025.04.21.649106v1

submitted 5 days ago • 0 comments

Genetic mapping of resistance: A QTL and associated polymorphism conferring resistance to alpha-cypermethrin in Anopheles funestus https://www.biorxiv.org/content/10.1101/2025.04.16.649184v1

submitted 5 days ago • 0 comments

Sustained MYB activity drives emergent enhancer activation and precise enhancer-promoter interactions https://www.biorxiv.org/content/10.1101/2025.04.16.649256v1

submitted 5 days ago • 0 comments

Early-Life Environmental Exposures Reprogram Epigenomic Aging to Alter Gene Expression Trajectories https://www.biorxiv.org/content/10.1101/2025.04.21.649824v1

submitted 6 days ago • 0 comments

Single cell resolution of an epigenetic signature of persister tumor cell https://www.biorxiv.org/content/10.1101/2025.04.16.649175v1

submitted 6 days ago • 0 comments

Early epigenetic priming of regeneration studied with a novel transgenic epigenetic reporter https://www.biorxiv.org/content/10.1101/2025.04.21.649771v1

submitted 6 days ago • 0 comments

High quality genome assemblies of African cattle breeds using PacBio HiFi sequencing https://www.biorxiv.org/content/10.1101/2025.04.17.649430v1

submitted 6 days ago • 0 comments

Cell-type-specific transposable element demethylation and TAD remodeling in the aging mouse brain https://www.biorxiv.org/content/10.1101/2025.04.21.648266v1

submitted 6 days ago • 0 comments

Evolution of the cellular landscape in mammalian striatum https://www.biorxiv.org/content/10.1101/2025.04.20.649707v1

submitted 7 days ago • 0 comments

VN1K: a genome graph-based and function-driven multi-omics and phenomics resource for the Vietnamese population https://www.biorxiv.org/content/10.1101/2025.04.15.648991v1

submitted 7 days ago • 0 comments

Inferring domestic goat demographic history through ancient genome imputation https://www.biorxiv.org/content/10.1101/2025.04.18.649576v1

submitted 7 days ago • 0 comments

alms1 regulates the immune response and brain ageing in zebrafish https://www.biorxiv.org/content/10.1101/2025.04.19.639742v1

submitted 7 days ago • 0 comments

CArP - CApture-based sequencing for Pathogen surveillance in complex matrices https://www.biorxiv.org/content/10.1101/2025.04.20.648581v1

submitted 7 days ago • 0 comments

Annotation of 200 Insect Genomes with BRAKER for Consistent Comparisons across Species https://www.biorxiv.org/content/10.1101/2025.04.17.649312v1

submitted 7 days ago • 0 comments

Cell type-specific epigenomic variation and its association with genotype in the human breast https://www.biorxiv.org/content/10.1101/2025.04.16.648998v1

submitted 7 days ago • 0 comments

Comparison of Three Next Generation Sequencers on Their Basecall Error Rates and Bias Patterns https://www.biorxiv.org/content/10.1101/2025.04.15.649007v1

submitted 7 days ago • 0 comments

The hidden life of Xylella: Mining the NCBI Sequence Read Archive reveals potential new species, host plants and infected areas for this elusive bacterial plant pathogen https://www.biorxiv.org/content/10.1101/2025.04.18.649540v1

submitted 7 days ago • 0 comments

A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures https://www.biorxiv.org/content/10.1101/2025.04.16.649149v1

submitted 7 days ago • 0 comments

A co-speciation dilemma and a lifestyle transition with genomics consequences in Wolbachia of Neotropical Drosophila https://www.biorxiv.org/content/10.1101/2025.04.16.649125v1

submitted 7 days ago • 0 comments

Large-scale identification of microsatellite loci from multiple otter (Mammalia, Carnivora, Lutrinae) species using whole genome sequence data https://www.biorxiv.org/content/10.1101/2025.04.14.648774v1

submitted 8 days ago • 0 comments

Uncovering Superior Alleles and Genetic Loci for Yield-Related Traits in Mungbean (Vigna radiata L. Wilczek) Through Genome-Wide Association Study https://www.biorxiv.org/content/10.1101/2025.04.15.648935v1

submitted 8 days ago • 0 comments

Before the Black Box https://www.biorxiv.org/content/10.1101/2025.04.14.648839v1

submitted 8 days ago • 0 comments

Genomic and Behavioral Signatures of Selection for Ethanol Preference from the Heterogeneous Stock Collaborative Cross Mice: The Central Nucleus of the Amygdala https://www.biorxiv.org/content/10.1101/2025.04.15.649004v1

submitted 9 days ago • 0 comments

Mammary gland metabolism and its relevance to the fetoplacental expression of cytokine signaling in Caveolin-1 null mice https://www.biorxiv.org/content/10.1101/2025.04.13.648647v1

submitted 9 days ago • 0 comments

Identifying non-coding variant effects at scale via machine learning models of cis-regulatory reporter assays https://www.biorxiv.org/content/10.1101/2025.04.16.648420v1

submitted 10 days ago • 0 comments

Methylation reprogramming associated with aggressive prostate cancer and ancestral disparities https://www.biorxiv.org/content/10.1101/2025.04.16.649098v1

submitted 10 days ago • 0 comments

Domestication shaped the chromatin landscape of grain amaranth https://www.biorxiv.org/content/10.1101/2025.04.17.649361v1

submitted 10 days ago • 0 comments

Human Papillomavirus Genomes Associate with Active Host Chromatin during Persistent Viral Infection https://www.biorxiv.org/content/10.1101/2025.04.15.649012v1

submitted 10 days ago • 0 comments

Direct genome sequencing of Leishmania tropica in tissues of Moroccan patients with cutaneous leishmaniasis reveals micro-focal transmission underlain by clonal and sexual reproduction modes https://www.biorxiv.org/content/10.1101/2025.04.17.649263v1

submitted 10 days ago • 0 comments

amr.watch - monitoring antimicrobial resistance trends from global genomics data https://www.biorxiv.org/content/10.1101/2025.04.17.649298v1

submitted 10 days ago • 0 comments

Snapshot of Defense Systems in Multidrug Resistant Klebsiella pneumoniae https://www.biorxiv.org/content/10.1101/2025.04.16.649094v1

submitted 10 days ago • 0 comments

PETScan: Score-Based Genome-Wide Association Analysis of RNA-Seq and ATAC-Seq Data https://www.biorxiv.org/content/10.1101/2025.04.10.648278v1

submitted 11 days ago • 0 comments

Biologically-informed Interpretable Deep Learning Framework for Phenotype Prediction and Gene Interaction Detection https://www.biorxiv.org/content/10.1101/2025.04.11.648325v1

submitted 11 days ago • 0 comments