compbiologist.bsky.social
ML/AI methods & tools for using massive public data collections to gain insights into complex disease mechanisms.
Associate Professor & Group leader thekrishnanlab.org at the Dept. of Biomedical Informatics at CU Anschutz.
20 posts
962 followers
152 following
Regular Contributor
Conversation Starter
comment in response to
post
🖐🏼
comment in response to
post
We just use the #papers-articles channel our group’s Slack workspace.
comment in response to
post
Incidentally, on ping with this discussion…
bsky.app/profile/harm...
comment in response to
post
… And what I hear is that we need smthing to be good for ourselves, our careers, & our personal advancement in order to do smthing that's good for science[/world]. And I just don't believe that's true.”
Love it: what’s the best thing to do, the right thing to do?
podcasts.apple.com/us/podcast/o...
comment in response to
post
🖐🏽
comment in response to
post
Same reason that nanopore work with direct clinical application gets published in Annals of Obscurities while the tumor poopome and AlphaFold3 (which wasn’t even competitive in CASP16!) get published in Nature over the objections of highly qualified reviewers
comment in response to
post
Because it makes for a better $$$ barrier to entry.
Broke: we fit a linear model and predicted results of a CRISPR screen
Woke: we burned down the Amazon to train a 96-head transformer on 500 million cells and did ALMOST AS WELL as the linear model that runs on my phone
comment in response to
post
🖐🏽
comment in response to
post
🖐🏽
comment in response to
post
🖐🏽
comment in response to
post
This is important. Please count need in.
comment in response to
post
Yes. I use this format.
comment in response to
post
The topics and resources look great, Michael.
I teach data & statistics communication as a small part of my "Gaps, missteps, and errors in data analysis" course.
It'll be great to learn more about how you go about it. I'll take a closer look at the website soon. Thanks for sharing!
comment in response to
post
“…and who started in a non-tenure track position only to get demoted from there. Let’s give her a few million dollars in unrestricted funding over the next 10 years.””
www.statnews.com/2022/02/01/k...
H/T Lucy O’Brien