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frodsan.bsky.social
Computational Ecologist. Researcher @unisevilla.bsky.social. ecology, biogeography, statistics, rstats, GIS, science. https://frodriguezsanchez.net
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New #rstats pkg gander is now on CRAN! gander is a coding assistant that knows how describe the objects in your global R environment. So, when you're working with data, LLMs will know the names, types, and distributions of data columns, resulting in much more effective completions.

The fallacy of single imputation for #traits databases: Use multiple imputation instead @methodsinecoevol.bsky.social #ecopubs doi.org/10.1111/2041...

I really liked this idea of using a histogram as a legend in a choropleth map (since land isn't unemployed; people are), so I made a little guide to doing it with #rstats, {ggplot2}, and {patchwork} www.andrewheiss.com/blog/2025/02...

1/ New paper @pnas.org on the structure of mutualistic #networks between individuals plants and frugivore species. Last chapter of @elequintero.bsky.social's PhD thesis doi.org/10.1073/pnas... #ecopubs

⚒️ CodeRefinery free online workshop on tools and techniques for more reproducible research; six half-days March 25-27 and April 1-3, 2025 More info and registration: coderefinery.github.io/2025-03-25-w... #RSEng #FAIR #researchsoftware #git

Amazing #Tansley #Review from Barnabas Daru on harnessing #herbarium data 🌿🌾☘🌸 to track hidden dimensions of plant biogeography, including plant redistribution: #species #range #shifts ⬇️ @newphyt.bsky.social shorturl.at/7epYs

Disequilibrium in plant distributions: Challenges and approaches for species distribution models - check our new review in @journalofecology.bsky.social doi.org/10.1111/1365... 🍃🌦️♨️🌿 #SDM #plants #speciesdistributions #ranges

The measles outbreak in Texas is reminding me of the public letter Roald Dahl wrote about losing his daughter to measles in 1962, just before the vaccine was publicly available.

Now officially published with its 2025 publ date. Looking beyond Popper: How Philosophy can be relevant to ecology. @oikosjournal.bsky.social A fantastic collaborative effort between ecologists and philosophers of science. #philosophy #ecology nsojournals.onlinelibrary.wiley.com/doi/10.1111/...

Nueva versión disponible de la aplicación web de AFLIBER! 👇👇👇 afliber.shinyapps.io/afliber/ Además de ser un poco más estética, ahora contiene mapas interactivos y búsqueda por cuadrícula UTM (además de por especie)!

My first R package is now available on CRAN! Shinyscholar is a template for creating complex analytical applications that are reproducible outside the application. 🧵 cran.r-project.org/web/packages... #rstats #rshiny #openscience

New version of {labeleR} on CRAN: easily create labels for scientific collections, badges, create and email hundreds of certificates automatically, etc #rstats ecologyr.github.io/labeleR/

Hardly new info, but BSky should know: Warsaw's water quality is monitored by eight clams with magnets attached to their shells. If contamination in the water causes the clams to close, the magnets trigger an alarm and shut off the city's water supply. Thank you, little guardian molluscs. 🧪🌏🚰

Insane amount of work! Congrats to everyone involved. Nicely highlights the importance of being open and transparent about your analytical decisions (and also providing data and code!).

Modern-Day Oracles or Bullshit Machines? Jevin West (@jevinwest.bsky.social) and I have spent the last eight months developing the course on large language models (LLMs) that we think every college freshman needs to take. thebullshitmachines.com

I am excited to announce that we are advertising a summer school in model-based multivariate analysis for ecologists. It will take place in Hjerkinn, Norway from 21-25 July. More information can be found at bertv.folk.ntnu.no/index.html and in this 🧵. #GLLVM

📖Published📖 Our new review highlights useful links (and differences) between Bayesian and frequentist approaches to smoothing, in an accessible way, with a focus on the mgcv implementation. Read more here 👇

Do you ignore the effects of #ConfoundingVariables in your models? Do you remove correlated variables because of a statistical test rather than causal reasoning? If so, read this paper by @jebyrnes.bsky.social and @lauradee.bsky.social! #AcademicSky 🧪🌏 onlinelibrary.wiley.com/doi/full/10....

New study explored preprint use in ecology & evolution! A few interesting things: ▪️ Most preprints are by authors who published their first paper in the last 10 years ▪️ Median time between preprint & publication is ~8 months ▪️ Authors are reluctant to share data & code with preprints (<50% did) 🧪🌏

"Towards a global understanding of tree mortality" in @newphyt.bsky.social It was fun and productive participating in this review by the International Tree Mortality Network nph.onlinelibrary.wiley.com/doi/10.1111/...

📣 Calling #BiodiversityData innovators! The 2025 Ebbe Nielsen Challenge has opened for submissions! ⭐ The annual GBIF grant programme celebrates innovation in the development of new and existing biodiversity data tools. 🕷️ Deadline: 7 September 2025 🔗 gbif.link/ebbe-2025

144,000 biological interactions extracted from 84,000 publications—in just a few hours using GPT4o. 🚀 The potential applications seem endless. Check out our preprint: doi.org/10.1101/2025... With @florianaltermatt.bsky.social

Have a species list and want to get a phylogeny for them? Try this R package: nsojournals.onlinelibrary.wiley.com/doi/10.1111/... Feedbacks are welcome.

On Tuesday 28 January at 16:00 h we will have the seminar ‘BlueCarbon R package: get stocks and sequestration rates estimations directly from raw laboratory data’ by @npjuncal.bsky.social We hope to see you all there👇

2024 was another record-breaking year for the EU’s electricity transition, as solar overtook coal generation for the first time. Here are the key things that happened in the 🇪🇺 power sector last year, all in one thread 👇 🧵 1/7

27% ecological journals require code sharing (not always fulfilled though). 38% require data sharing #openscience

Very excited this paper is now out in Ecology Letters onlinelibrary.wiley.com/doi/epdf/10.... #causalsky