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hipcproject.bsky.social
This collaborative #openscience data project probes immune systems. Funded by NIAID since 2010. https://immunespace.org
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We are almost 15 yrs old πŸŽ‚- and include Benaroya Institute, MIT, Columbia, Yale, @lji.org Seattle Childrens, @stanfordimmunology.bsky.social Icahn Mt. Sinai School of Medicine. (and ++ ) See our link for more immunespace.org #systems #immunology #meeting

Great story on collaboration! @danielaweiskopf.bsky.social and Eva Harris and others. #dengue

Go look at our #data Free and #FAIRsharing. 144 studies, 10,244 human participants and > 135,000 samples. #systems #immunology @immportdb.bsky.social #IDsky #immunesky Check our #analysis tools at immunespace.org immport.org/resources/hipc

Our collaborators identify multi-omic factor that predicts #LongCovid Among 50+ authors include @sesmalab.bsky.social @joanndarce.bsky.social @bjoernpeters.bsky.social @slimfourati.bsky.social @droferlevy.bsky.social @leying2024.bsky.social #IDsky #MedSky www.biorxiv.org/content/10.1...

Our manuscript on multiomics prediction of #LongCOVID is now up on bioRxiv! πŸŽ‰ Huge kudos to the entire #IMPACC Network, especially Lauren Ehrlich (UTex), Gisela Gabernet (Yale), and our incredible multiomics team for pushing this forward. Now, we wait! πŸš€πŸ“‘ #SystemsBiology #COVID19

Our collaborators @rgottardo.bsky.social and Ken Stuart (+ others) describe tagtango, an application to compare #single-cell annotations. #bioinformatics academic.oup.com/bioinformati...

In late February, experts will convene to decide what #flu viruses next winter's flu vaccines should target. The #CDC & #FDA have 2 of the 10 votes around the table. This year it's not clear they'll attend, which could make things challenging for manufacturers. www.statnews.com/2025/02/13/w...

Our collaborators write in #preprint about long-term effects of repeated #COVID19 vaccinations + chart spike-specific T cell + antibody responses Authors include: Shane Crotty, @settelab.bsky.social Greg Seumois, @danielaweiskopf.bsky.social , Pandurangan Vijayand + www.biorxiv.org/content/10.1...

Our collaborators, identified in post, plus Eu-Cheol Shin. Congrats for lining everybody up! #IDSky #ImmuneSky #systems #immunology

Our collaborators will be in #Osaka at Takeda Symposium - including @virusesimmunity.bsky.social @tsanglab.bsky.social Donna Farber, Bali Pulendran and Mark Davis. (Take a photo for us?)

Looking forward to attending the 22nd Takeda Science Foundation Symposium on Bioscience in Osaka next week and catching up with immunology colleagues. 第22ε›žζ­¦η”°η§‘ε­¦ζŒ―θˆˆθ²‘ε›£η”Ÿε‘½η§‘ε­¦γ‚·γƒ³γƒγ‚Έγ‚¦γƒ -γƒ’γƒˆε…η–«η³»γ‚’θ§£γζ˜Žγ‹γ™

Our collaborator Eva Harris (and others) catalog insights from 19 years of studying over 15,000 pts with #dengue #PLOS #tropical #disease #IDsky #nicaragua @plos.org journals.plos.org/plosntds/art...

Our collaborator, Eva Harris, + others study children with #dengue, #Zika + #chikungunya to find better ways to distinguish those diseases early. In a preprint, authors describe distinguishing factors. @medrxivpreprint.bsky.social pmc.ncbi.nlm.nih.gov/articles/PMC11

Our incredible research technicians are heading to graduate school this fall!πŸ₯³ We need a new scientist for our productive & collaborative lab focused on human immunology and vaccinology. You must have: a deep passion for science, unwavering honesty, and a strong sense of responsibility. Contact us!

Scan our 143 studies about #systems #immunology at @immportdb.bsky.social (all #data free #FAIRsharing) Filter by disease, assay type. Explore, discover, find insights. #IDsky #MedSky

First AIRR-C seminar of the yearπŸŽ‰ on January 30th at 4pm CET, 10am ET, 7am PT. antibodysociety.org/the-airr-com... With Mikhail Pogorelyy (TIRTL-seq) and Eglantine Hector (inference of phylogeny and selection pressure in BCR sequences).

Our collaborators Donna Farber + @tsanglab.bsky.social are both speakers at #AAI2025 in Hawaii in May. Farber will speak about tissue-resident #Tcells and Tsang about analysis of data leading to predictions for #systems #immunology immunology2025.aai.org

Looking forward to hearing from the great speakers lined up for the β€œ2025 Immcantation Users Group Meeting!” Check out the program and register for this free virtual meeting 1/30/25 10AM-1:40PM (ET) at: immcantation.github.io/users-meetin... @immcantation.bsky.social

Working with a great team to organize @keystonesymposia.bsky.social on "#LongCOVID and Other Post-Acute Infection Syndromes #PAIS" #KSLongCOVID26 @patientled.bsky.social @daltmann.bsky.social August 10-13, 2025 | Santa Fe Hope to see you there! keysym.us/KSLongCOVID26

#NIH HIPC consortium starter pack with added members @slimfourati.bsky.social @bjoernpeters.bsky.social @joanndarce.bsky.social @immunespace.bsky.social go.bsky.app/AozZWPx

Our collaborators find distinct #COVID19 dysregulation in sold organ #transplant recipients. #multiomic profiling including #microbiome Authors include @skleinstein.bsky.social @droferlevy.bsky.social @joanndarce.bsky.social and others @naturecomms.bsky.social www.nature.com/articles/s41...

The new discoveries of #megakaryocytes and #immunology. Glad to see both original paper and your Views article. Glad to see our collaborators finding new avenues for durability. @stanfordimmunology.bsky.social ++

Story from @stanfordmedicine.bsky.social about the work of some of our collaborators. #vaccine #durability Including Bali Pulendran, @therealimmunecell.bsky.social Nadine Rouphael, Mark Mulligan and @tsanglab.bsky.social med.stanford.edu/news/all-new...

Our collaborator @scottboydlab.bsky.social and colleagues pioneer AIRR-seq method for allele inference. #adaptive #immune #sequencing @airr-community.bsky.social @genomeresearch.bsky.social genome.cshlp.org/content/34/1...

Excited to see this paper out. Durability is the holy grail of vaccine design. πŸ’‰ Here, we made the unexpected discovery that megakaryocytes, the cells that produce wound-healing platelets, can support long lasting vaccine immunity! #BiologyIsWild! πŸ§¬πŸ”¬ Glad I could be part of this wonderful team!

Our collaborators analyze multiple predictors of antibody response in #vaccines in humans. @natureportfolio.bsky.social Authors include: Bali Pulendran, Mark Mulligan, @tsanglab.bsky.social Steve Bosinger, @therealimmunecell.bsky.social www.nature.com/articles/s41...

Nice to see our collaborator Bali Pulendran, as keynote, and others from our project: Mark Davis, @skleinstein.bsky.social @tsanglab.bsky.social Looks like a great meeting. #systmes #immunology

Our collaborator @virusesimmunity.bsky.social is among those looking back at 5 years of #covid19 and parsing #immune #science. @bbcbreaking-bot.bsky.social www.bbc.co.uk/sounds/play/...

The #H5N1 #birdflu virus from a severe case in Louisiana shows it was developing mutations that could help it attach to cells in human respiratory tracts, including a mutation seen in a recent severe case in British Columbia, Canada, the #CDC reported today. www.statnews.com/2024/12/26/c...

Find some of our over 50 investigators in Starter Pack. If you are one in our collaboration - please reply OR write a DM to @rgottardo.bsky.social to ask to be added. (Know you need adding - @camilacoelho.bsky.social and @joanndarce.bsky.social ) bsky.app/starter-pack...

Our collaborator Doug Lauffenberger (+ others) explain how #Markov model helps take noise from #data on #BCG vaccine in #macaques @cellpress.bsky.social #tuberculosis www.cell.com/cell-systems...

$1 million dollars up for grabs from @NIH for the teams that come up with the best measures of research data sharing, also known as a Data Sharing Index (S-index)! www.freelancer.com/contest/nih-... HT @michaelfchiang.bsky.social

Our collaborator Nadine Rouphael (and co-authors) gaze into the future of #vaccinology for @idsainfo.bsky.social #computational #epigenomics #microbiome academic.oup.com/jid/article/...

All of our #data on #immune responses in #humans (11,846 samples) is free + downloadable for you to analyze. #IDsky #dengue #WestNile #tuberculosis #covid-19 (and more) at @immportdb.bsky.social and immunespace.org

This πŸ‘‡πŸ» www.nytimes.com/2024/12/14/h...

Our collaborators chart the regulation of #immune memory to #covid19 in #lung and #lymphoid tissues. Authors include Peter Sims, Donna Farber, Alba Grifoni, Daniela Weiskopf and Alessandro Sette. www.cell.com/immunity/ful...

Glad to see three of our collaborators in one place. #flu #IDsky #MedSky

Our collaborators designed an #immune health metric, a way of calculating the state of the #system. Study from earlier this year. Authors include @tsanglab.bsky.social @skleinstein.bsky.social #IDSky #MedSky @naturemedicine.bsky.social www.nature.com/articles/s41...

Includes my star colleague, @rongfan8.bsky.social. Inspiring @yalemed.bsky.social @hipcproject.bsky.social. "the importance of integrating complementary technologies such as spatial transcriptomics and spatial epigenetic profiling to gain a more holistic understanding of biological complexity."