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iwatobipen.bsky.social
Medicinal Chemist, Cheminformatician, Runner and ?
306 posts 1,093 followers 772 following
Prolific Poster

Integration Chembl REST API and Claude with MCP #cheminformatics #mcp #ai Last week I have an opportunity to visit UK for my bussines. I could see beautiful rape blossoms from my way to hotel from Heathrow air port! I participated a workshop as a organaizer and we discussed cutting edge of synergy…

www3.nhk.or.jp/news/html/20...

I arrived at Haneda AP at 0:10 A.M. from Kansai international AP. Tooo long flight 🛫

まさかの関空行くことになるなんて 悲劇

The flight route was changed from Haneda to Kansai international AP. Due to bad weather. :-(

I could learn lots of things from the workshop. Also could have fruitful discussions with many participants. Thanks so much!

It’s still big change how to evaluate the effectiveness of data analytics processes improvement in drug discovery projects. Because it’s difficult to show clear contributions to find clinical candidates. IMHO But it is REALLY important:)

And I love Datagrok datagrok.ai

It’s a cool product for data science! www.datavisyn.io

Pie of the day and Beer after my work 😊

platform.opentargets.org

Happy to see ChemRxiv now has a Bluesky button! #chemsky

I’m moving to Hinxton now. It’s far from Heathrow AP.

github.com/rdkit/rdkit/...

Super useful! I didn't actually know this trick

Boltz-1 supports cyclic peptide! github.com/jwohlwend/bo... That's super cool!

NEW content online!

Using MolGraph on Google Colab youtu.be/YK5qoCjrRAg #compchem

The new #RDKit blog post is a tutorial on how to specify atomic property changes when using chemical reactions. greglandrum.github.io/rdkit-blog/p...

New Diffusion model based docking tool #MolSnapper #cheminformatics #RDKit Recently I think relationship between ML and CADD become more closer compared to several years ago. DiffDock is one of the very nice work for interation of cheminformatics and SBDD. It uses diffusion model for…

Scientific discussion is always exciting

ai-2027.com/slowdown

FYI: New online! Transcriptomics in the era of long-read sequencing

pubs.acs.org/doi/10.1021/...

The new #RDKit blog post builds on the recent one about similarity hit set overlaps by taking similarity noise levels into account. greglandrum.github.io/rdkit-blog/p...

I think this is one of the cool visualization approach of SAR. www.sciencedirect.com/science/arti...

journals.plos.org/ploscompbiol...

www.sciencedirect.com/science/arti...

www.nature.com/articles/s41...

link.springer.com/article/10.1...

Researchers from China and five other ‘countries of concern’ barred from NIH databases | Science | AAAS www.science.org/content/arti...

single-cell data integration best practice www.sc-best-practices.org/cellular_st...

Sometime 'drug likeness' of compound structure depends on researcher's preferences. And it seems lacking in objectivity for me.

Shinkansen is good space for reading papers.

This week's short #RDKit blog post introduces some new functionality for interrupting long-running calculations. greglandrum.github.io/rdkit-blog/p...

music.apple.com/jp/album/lib...

Nonadditive SAR analysis #cheminformatics #rdkit #mmpa iwatobipen.wordpress.com/portfolio/no...

Nonadditive SAR analysis #cheminformatics #rdkit #mmpa I visited San Diego last week and have opportunity to discuss with lots of researchers. It was really a great experience for me. And I could get positive feedback from my blog post. BTW, Sometime medicinal chemist try to conbine positive…

10km jog ✅

"We need to consider how to foster #trust in AI, ensuring that concerns about its risks don’t overshadow its benefits", says Alex Ilic, from the ETH AI Center. Read this piece on trustworthy AI - the last part of our focus week on trust from ETH Zurich's "Globe" magazine. ethz.ch/en/news-and-...

Role of manager is not only management but also following the cutting edge of science. I think.

一般社団法人バイオDX推進機構主催で、坊農によるセミナー「バイオDXの世界 ゲノム解析を学び、実践に生かす」(2025年3月29日)がハイブリッド開催されます。 www.biodx.org/post/2025-03... 参加無料ですので、ご興味のある方は下記フォームよりお申し込みください。 ●開催日時: 令和7年3月29日 (土) 13:00~15:30(受付・会場 12:30) ●会場: 広島大学フェニックス国際センター ミライクリエ miraicrea.hiroshima-u.ac.jp#cb_6 ●申込: forms.gle/tNBw2xsc5QuX... #bonohulab

9km Running done. And I found spring at today’s running course.

The new #RDKit blog post is an update of an older tutorial on displaying fingerprint bits. greglandrum.github.io/rdkit-blog/p...

Back to Japan!