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joelluethi.bsky.social
Head of Research and Development of the BioVisionCenter at the University of Zurich
8 posts 398 followers 188 following
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🚨Job alert: We're hiring a Data Scientist (Image Analysis) to join our Facility for Advanced Imaging & Microscopy. The facility provides cutting-edge light and electron microscopy, high-content screening, image analysis and spatial-transcriptomics services. Apply at: www.fmi.ch/education-ca...

Hi folks! napari is officially on bsky now! πŸ₯³ Let's hit the ground running with a reminder that all are welcome at our next (Atlantic) community meeting on Feb 12, 8:30am SFO / 11:30am NYC / 5:30pm Paris. Agenda and details here: hackmd.io/BXWDZ3i8Q6OA...

We're hiring! Our IT Team is looking for a Linux Systems Engineer to support scientific computing and big data management. Apply here: www.fmi.ch/education-ca...

TL;DR installers are really challenging to make. The team made some tooling for @napari.fosstodon.org.ap.brid.gy that was so fantastic that it is spreading across the scientific python ecosystem!

We are searching for a highly motivated and talented computational postdoc with an interest in translational spatial omics to join our team in Heidelberg. Apply now! karriere.klinikum.uni-heidelberg.de/index.php?ac...

Don't forget registration and abstract submissions are *OPEN* for #mmc2025, taking place once again in the wonderful city of #Manchester, UK this summer. Don't miss out!: mmc-series.org.uk @rmsearlycareer.bsky.social @bioimaginguk.bsky.social @bioimagingna.bsky.social

Permanent position for a Linux Systems Engineer: Are you fond of scientific computing and/Linux/HPC and would enjoy working in a vibrant research environment? Have a look at our job opening: www.fmi.ch/education-ca...

Microscopy Nodes is now up on bioRxiv! πŸš€ This is a Blender extension that seamlessly integrates and visualizes 3D microscopy data (TIF & @zarr.dev). High-quality volume rendering for anyone, in both EM and fluorescence, regardless of computational expertise! πŸ”¬ www.biorxiv.org/content/10.1...

πŸ“’ As announced at the end of 2024, Swiss researchers can now take part in almost all #HorizonEurope calls for the 2025 programme year. ℹ️ More information about these calls can be found in our news:

2025 is now well underway and we are happy to announce that ZIDAS is coming to Basel this year ! 2025.zidas.org

I’m so excited to share my new website with you all! πŸŽ‰ Check it out at falk-illustrations.de, explore my artwork, and feel free to reach out if you're interested in commissions or just want to chat! #SciArt #Illustration #NewWebsite #Cartoons #Excited #AndABitProud

πŸŽ‰ Zarr-Python 3 is here! πŸŽ‰ - Full support for Zarr v3 spec - Chunk-sharding for more efficient data storage - Major performance boosts with async I/O & parallel compression πŸ’» pip install --upgrade zarr πŸ’» conda install --channel conda-forge zarr Blog post: https://buff.ly/3C3OwYw

πŸš€ Applications for a Software Developer position at GerBI close on 31st January. Don’t miss out & apply now!

We released Zarr-Python 3 today, complete with support for the v3 spec, new extensions (chunk-sharding) and significant performance gains. earthmover.io/blog/zarr3-r...

Hi, Zarr community! πŸ‘‹ 🚨 Big news: Zarr-Python 3.0 is dropping next week! 🚨 If your project depends on Zarr-Python, make sure to check out the migration guide to get ready for the update. Guide: https://buff.ly/3W0cLxd More updates soon! πŸ§‘πŸ»β€πŸ’»

πŸš€ We're hiring! Join the German BioImaging Team as a Software Developer! πŸ’» Build scalable #bioimaging solutions 🌍 Collaborate globally 🎯 Contribute to open science through #OMEZarr @openmicroscopy.org Remote, full-time. Apply by 31 Jan 2025: bit.ly/3Zrd4SR

🌟We are looking for a new member of our image analysis team at the Imaging Core Facility of the Biozentrum in Basel 🌟 Are you passionate about science and technology? Are you interested in bioimaging? Please check the job ad below #JobOpportunity #ImageAnalysis #DeepLearning @biozentrum.bsky.social

πŸ“£ Many #EuroBioImaging Nodes, facilities & friends are on BlueSkyπŸ¦‹! Here are some to follow πŸ”½ @bioimaginguk.bsky.social @france-bioimaging.bsky.social @danishbioimaging.bsky.social @sln-icfo.bsky.social Don't miss the starter pack πŸ”½ go.bsky.app/VoeAfuN Join us - Nominate yourself or reply here!

Please help the #Zarr community welcome @normanrz.bsky.social as the newest member of the Steering Council! πŸ‘πŸΌ zarr.dev/blog/steerin...

I could not be more thrilled to announce the Nature Methods @naturemethods.bsky.social Method of the Year is Spatial Proteomics! Please see our editorial as a roadmap to the fantastic content in this special issue! www.nature.com/articles/s41...

We are looking for a #PostDoc with experience in #BioImage Analysis @ETH in #Basel, CH. Our mission: translate image-derived insights into mechanistic models of development & disease #lightsheet #ultrasound #CT www.jobs.ethz.ch/job/view/JOP...

If you're chatting about Zarr on BlueSky, be sure to use the fancy new handle @zarr.dev πŸ”₯

This was a really fun interview to do. Hopefully the obvious passion that Florian has for his work comes through in the interview. I was also happy to learn some new tactics/approaches to arranging a time for the interview!

My first post here to celebrate the lab and their achievements. What a fantastic night!

I made a BioImage Analysts Starter pack. Reachout if you're missing on it πŸ”¬πŸ’»πŸŒ go.bsky.app/2hPEBDu

Let’s get an overview of all the people doing OME-Zarr work here on Bluesky. Who can help me fill this list? Self-nominations are welcome πŸ˜… go.bsky.app/APWnuCs

Have you ever analyzed a #microscope image before- even just a single one? Please take our survey on progress and places to still improve for image analysis software! #microscopy #imageanalysis #bioimageanalysis forum.image.sc/t/2024-image...

Co-organized by @nfdi4bioimage.bsky.social through @joshmoore.bsky.social & Christian Tischer, we're happy to see the #OME_NGFF_Hackathon 2024 in full swing! Exciting work bringing forward #OMEZarr for #FAIR bioimage data management. Shout out to the host BioVisionCenter! @gerbi.bsky.social #NFDI

This week, we're hosting the #OME_NGFF_Hackathon 2024 at the BioVisionCenter at the University of Zurich. We're bringing together 40 motivated researchers and specialist for #OMEZarr workflows, #OMEZarr Python tools & #OMEZarr Java tools. (1/3)