kenibrewer.bsky.social - Profile | ThreadSky | a Reddit-style client for Bluesky

I'm doing a webinar next week about instrument-to-analysis automation of bioinformatics data processing!

submitted 8 days ago • 0 comments

Super excited for the distributed nf-core hackathon! We've got 36+ local sites being organized in over 20 countries! Registration is now open!

submitted 23 days ago • 0 comments

This is a call out to bioinformatics developers that we are working to get all of NF-Core pipelines (and by extension most of Bioconda) to support Arm. Spot price for c8g.16xlarge (Graviton4) and it is below 60¢/hr. Or < 1¢ per physical CPU if your application supports Arm ...

submitted 30 days ago • 1 comment

Attending #SLAS2025? Don't miss our exclusive Exhibitor Tutorial at 2:00 PM today in Room 24C! In this talk, we will discuss how @nextflow.io and Seqera are simplifying the analysis of large-scale sequencing and cell imaging data! 🔗 Can't attend? Get the recording instead: hubs.la/Q034lfYZ0

submitted 30 days ago • 1 comment

I'm attending SLAS! Come find me at our booth if you want to chat about anything Nextflow-related. I'll also be presenting a tutorial about setting up event-driven bioinformatics automation using Nextflow and Seqera Platform. I hope to see some of you there!

submitted 48 days ago • 0 comments

One of my favorite talks at the @nextflow.io summit was @kenibrewer.bsky.social's talk on how to NOT contribute to nf-core (using nf-core in your organization). He wrote a nice post on the @nf-co.re blog on building an nf-core style modules library for your organization seqera.io/blog/buildin...

submitted 56 days ago • 0 comments

I wrote a blog article about some of the best parts of nf-core's modular tooling and how to use it within your own organization. This was an extension of a talk I gave at the Nextflow Summit late last year. Read or watch however you prefer! www.youtube.com/watch?v=Pn_B...

submitted 51 days ago • 0 comments

I didn't do any work directly on the OLE project during my time in the Breaker Lab, but I'm convinced that OLE is one of the most exciting bacterial #ncRNA to be discovered in recent years. Definitely check out this preprint if you'd like to see some really exciting RNA #cryoEM structures.

submitted 58 days ago • 0 comments

Our next hackathon is rapidly approaching! 🚀 - March 24-26, 2025 - Online / local distributed sites For the distributed sites, WE NEED YOU! 🎯 If you're able to book a meeting room and host a local site, fill in the local site registration form: nf-co.re/events/2025/...

submitted 71 days ago • 1 comment

Know someone looking for a new start in 2025? 🔍 Colleagues of #BlueSci, help flex this new social muscle! 🦾

submitted 76 days ago • 0 comments

Exciting news! 🎉You can now try Chai-1, the SOTA model for biomolecular structure prediction by Chai Discovery, with Seqera! 👉 Check it out: github.com/seqeralabs/n...

submitted 79 days ago • 1 comment

We’re thrilled to share our Nature Methods review on #CellPainting — your go-to resource for mastering Cell Painting! From MOA and toxicity prediction to contributing to candidate drugs in clinical trials, we’ve distilled 10 years of insights!

submitted 84 days ago • 2 comments

📍Pinned Post: Welcome to the papers with code feed! bsky.app/profile/did:... Papers from PubMed, bioRxiv, Bature, PLoS, etc, with links to GitHub will be included here. Anyone can post to this feed. See also: blog.stephenturner.us

submitted 84 days ago • 0 comments

Really exciting seeing the results from this incredible effort come out!

submitted 84 days ago • 0 comments

Are you looking for job opportunities where your #Nextflow skills are valued? Check the list we've compiled below. 👇 #Jobs #Opportunities

submitted 86 days ago • 1 comment

This is really cool, definitely worth a look for anyone running in environments where container security is of concern (which should be.. everywhere, right?) 📦🔒✨ The magic here for me is being able to automatically halt pipeline runs if new container CVEs are released. Totally hands off but safe.

submitted 93 days ago • 0 comments

Really exciting to see @valenceai.bsky.social open-sourcing a large, curated, FAIR resource for #QuantumMechanics datasets. Pre-computing missing values needed to train #ML models is also fantastic from a #GreenAlgorithms perspective. #OpenScience

submitted 93 days ago • 1 comment

I'm really sad to see Spring Science winding down. Having worked closely with them in a previous role during a software evaluation, I was incredibly impressed by the quality of their tooling and the caliber of their team. https://x.com/kamens/status/1858585137690407038

submitted 93 days ago • 0 comments

Love seeing the new @seqera.io AI starting to be used for real-world uses, after we've been testing it with toy examples for so long.. 🧪 Great little blog post by Lorena! 🎉 lpantano.github.io/post/2024/ne...

submitted 96 days ago • 0 comments

If you already have the Nextflow VSCode extension installed be sure to update to the latest version because it is 🔥🔥🔥. The language server that the extension includes has other cool implications for the future of Nextflow tooling. Attend the webinar for details!

submitted 98 days ago • 0 comments

If you missed the Nextflow Summit, this is a great way to catch up on major innovations coming to the Nextflow ecosystem. Seqera AI in particular is exceptional at writing proper DSL2 Nextflow code which has been a major frustration of mine with other code assistants. Highly recommend!

submitted 99 days ago • 0 comments

Are you looking for job opportunities where your #Nextflow skills are valued? Check the list we've compiled below. #Jobs #Opportunities

submitted 100 days ago • 2 comments

We believe in a future where science is open to all. Where community is the driving force of discovery. With no limits on knowledge, technology can take humanity to new frontiers. We are here to advance science for everyone through software. www.youtube.com/watch?v=uq5G...

submitted 101 days ago • 0 comments

🚨We're recruiting! Interested in making science and computing more environmentally friendly? Now's the time! Very excited to build a research group at Cambridge Uni to expand our Green Algorithms work thanks to the support of the Wellcome Trust www.green-algorithms.org/join-us #AcademicSky #SciSky

submitted 108 days ago • 3 comments

New social ... who dis?

submitted 106 days ago • 0 comments