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kezc.bsky.social
Lecturer in cancer bioinformatics at Cardiff University. https://github.com/kcleal
13 posts 705 followers 648 following
Getting Started
Posts 8 Comments 7

@adbeggs.bsky.social Hi Andrew. Fantastic talk today at the WCRC conference! It was very inspiring 👏

submitted 15 hours ago • 1 comment

🧬🖥️ Just released Dysgu v1.8 which now supports phasing of structural variants when using long reads. Makes SV calling much more sensitive - see PacBio benchmark 👉 github.com/kcleal/SV_Be... dysgu repo github.com/kcleal/dysgu...

submitted 5 days ago • 0 comments

🧬🖥️ Sharing an update to my SV benchmark repo. More callers have been added for the CMRG/GIAB benchmarks. github.com/kcleal/SV_Be.... Also now uses #Nextflow and tests the newest #PacBio Vega data, along with #ONT kit14. Results are on the GitHub page 👉

submitted 94 days ago • 2 comments

Hi all. Just released a fast library (C++/Rust/Python) for performing interval intersections. Uses a novel superset-index that tends to be faster than current libs, and also has a SIMD accelerated counting algorithm 👇 github.com/kcleal/super...

submitted 105 days ago • 4 comments

I made a starter pack for algorithmic genomics. It's certainly incomplete, but already has a ton of awesome peeps. Let me know if you know people I should add (with a focus on algorithms and data structures in genomics) go.bsky.app/TRWCnZs

submitted 111 days ago • 25 comments

BioNumpy looks really good, looking forward to giving this a try www.nature.com/articles/s41...

submitted 112 days ago • 0 comments

I created a genomics+bioinformatics starter pack. If I left you off, *please* reply and I'll add you! go.bsky.app/B5YYBfq

submitted 132 days ago • 99 comments

Hello world! This looks promising

submitted 537 days ago • 0 comments