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kguschan.bsky.social
Senior Lecturer at EdinburghUni, PI at UppsalaUni. Genomics of mammals, particularly primates, and their microbes from bad samples #aDNA #museums. AE with GBE SMBE
20 posts 578 followers 723 following
Prolific Poster

Press release about our latest giraffe diet-microbiome study here: www.eurekalert.org/news-release... @animecol-uu.bsky.social @brown-ibes.bsky.social #microbiome #diet #metabarcoding #giraffe

Do you use Darwin Tree of Life (DToL) genomes for your work or grant applications? If so, can you please fill out this form? docs.google.com/forms/d/e/1F... We are gathering info on how DToL genomes are used. It will help us raise money to continue producing publicly available high-quality genomes.

Nothing better today than a message from our colleague Sergey Gaschack on FB about the recovery of several of his camera traps that were left in #Chornobyl for years, inaccessible due to war. Incredible #ChornobylWildlife footage amid the sound of war. Have a look: www.facebook.com/gaschak/vide...

globally, there are ~3500 described mosquito species in the Culicidae family and many of these are important vectors of disease but only a small percentage have genomic resources. we are launching a pilot project to generate high quality reference genomes for 100 important mosquito species [1/3]

Yesterday @axeljensen.bsky.social absolutely rocked his PhD defense, with brilliant opposition by @joanameier.bsky.social! There’s no better feeling for a #proudPI #PhDone @animecol-uu.bsky.social

Congratulations Dr. @axeljensen.bsky.social on a successful PhD defense! 🍾🥂🎉 Well done!

Huge congrats, Dr Jensen! Wonderful presentation and superb discussion! 🥳🎉 Many thanks to @joanameier.bsky.social and the committee for so many nice questions and perspectives. Quoting the committee members: "We all agree that this is one of the best theses we've had the pleasure to read." 💪

Associate prof position at Stockholm U in plant molecular physiology, including phytoplankton www.su.se/department-o...

Flag up for @axeljensen.bsky.social ‘s defence today!

📣 New PhD position on flycatchers with @qvarnstromlab.bsky.social — spread the word! Combine bioinformatics, long-term datasets and field work to explore climate adaptation and speciation in the lovely flycatchers. Join us in Uppsala, Sweden! Apply by Mar 18: www.uu.se/en/about-uu/... #ecoevojob

Absolutely mind-blowing seminar by @joanameier.bsky.social today @animecol-uu.bsky.social: different mechanisms sparking massive radiation in fishes and butterflies.

The stunning beauty of Swedish winter

SMBE job posting - Social Media Editor to represent SMBE and its journals Part Time (0.5 FTE) Salary: $40,000 yearly We're seeking a dynamic and creative Social Media Editor to represent SMBE and its journals. evol.mcmaster.ca/brian/evoldi... Details on our website soon as well.

Our new collaborative paper led by @laskyjr.bsky.social 's @upenn.edu & Lua Lopez's Cal State U Labs. tinyurl.com/2hsdzd68 @ucllifesciences.bsky.social #herbarium #genomics Stasis and Genetic diversity in Arabidopsis thaliana across centuries.

Notes on draft

Back in Uppsala for a week. @axeljensen.bsky.social will be defending his thesis coming Friday, with @joanameier.bsky.social as opponent. A joyous and a thoughtful occasion for a visit. But the sights are incredible!

Mammatus clouds in the French Alps ✨ #landscapephotography #alps

With @katiejenike.bsky.social and a bunch more of our fellow k-mer enthusiasts, we put together a manuscript on k-mers in biodiversity genomics. A guide if you will, that covers k-mers from basics to some really funky stuff... genome.cshlp.org/content/35/2...

⚠️ From @iaeaorg.bsky.social During last night, at around 01:50, IAEA team at the #Chornobyl site heard an explosion coming from the New Safe Confinement, which protects the remains of reactor 4 of the former Chornobyl NPP, causing a fire. They were informed that a UAV had struck the roof.

New paper out! 📄 My first adventures in (ancient) metagenomics. 🦠 “Exploring DNA degradation in situ and in museum storage through genomics and metagenomics” www.nature.com/articles/s42... Curious about the water color painting (see ALT text)? 🦌 Thread (Bluetorial?) with findings! 🧶👇 (1/n)

What if you built a billion-story building? Watch the latest What If? video collaboration with MinuteEarth! youtu.be/Z_xJ40QXu7Q

The far side of the moon, illuminated by the sun, as it crosses between the DISCOVR spacecraft's camera and the Earth - one million miles away. 🔭 🧪

I am so excited to see @axeljensen.bsky.social present his achievements of the last 5 years! A truly impressive collection of published and unpublished work on the genomics of a crazy monkey group, the guenons, including academic.oup.com/mbe/article/... www.nature.com/articles/s41...

@axeljensen.bsky.social is next in line to defend his PhD thesis — it's already 'nailed' according to Swedish tradition ✨ Read his work, "Genomics of an African primate radiation" 👉 uu.diva-portal.org/smash/record... The defense will be in two weeks, with @joanameier.bsky.social as the opponent!

‼️These #PSMC #peaks are #artifacts‼️ Seen #PSMC results like this🤔? They are caused by ill-set parameters, #very #common, and #easy #to #solve! For details see 🧵& OA paper @currentbiology.bsky.social 🙂🐢🧬🎉! cell.com/current-biol...

Our new paper shows that plasticity that has evolved to deal with one stressful situation, can help plants to adapt rapidly to new stressful situations. doi.org/10.1073/pnas... @meebangor.bsky.social @rbgkew.bsky.social @ukri.org @pnas.org

Check out our new study 👇 With @denovorego.bsky.social and @alexfhart.bsky.social

I had never realised that until @terriblemapshq.bsky.social posted this on the other social media. 🧪

Modern-Day Oracles or Bullshit Machines? Jevin West (@jevinwest.bsky.social) and I have spent the last eight months developing the course on large language models (LLMs) that we think every college freshman needs to take. thebullshitmachines.com

! IMPORTANT ! SPAAM is moving from Slack to Element (Matrix)! You can find our SPAAM space at matrix.to#/#spaam:arch... Please, follow this link for more information and instructions www.isbarch.org/chat See you there!

#Gibbons are another of those animals that are rarely flattered by #taxidermy (many historic specimens were made by taxidermists who had never seen a whole one). This #gibbon at the Sorbonne Zoology Museum has been given a neck-pouch that's bigger than its head.

The primary eyes of spiders are known to exhibit a pigment ring shortly after ecdysis (moulting). During this phase, the lens grows until the pigment ring is no longer visible. The pigment rings are typically more visible in salticids and deinopids.

Our mealybug B chromosome paper is finally out, a small cross-generational gem from @laurarossevo.bsky.social's lab. academic.oup.com/gbe/article/... A few interesting things we found 👇

Changes of the centromeric sequence may underlie the unusual inheritance and programmed #DNA elimination of the germline-restricted #chromosome in songbirds www.biorxiv.org/content/10.1... #genome #evolution

It's all gone. They've taken down all the CDC datasets from data.cdc.gov Data that's critical for public health & research. Data paid for by citizens. That the government now censors. "Do not fear those who tell the truth. Fear those who try to hide it. They are willing to sacrifice other things."

www.afro.who.int/countries/ug...

Humidifier Review xkcd.com/3044

Didn't know that the perks of giving a talk at #PGG58 / #PopGroup58 would mean doing a podcast with @heredityjournal.bsky.social, being interviewed by Mike Pointer. A great experience talking about the meeting and the science we do!

When you look for secreted biomarkers and only find BSA

Our long term project has finally been published - genetic diversity is lost worldwide, but we can also make a difference and conservation actions matters. Find out more in the Science news here www.science.org/content/arti... #Consgen

How we hunt viruses in the museum: scilog.fwf.ac.at/en/magazine/...