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loreament.bsky.social
Evolutionary biologist interested in genomics, speciation, reproductive strategies, fungi, and biodiversity. And cats! She/her
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On #InternationalDayofWomenandGirlsinScience let me remind you that we are NOWHERE NEAR parity. A few examples. 1. Women are credited less in science than men. www.nature.com/articles/s41...

New preprint! We find a novel signal of positive selection in georeferenced genotype data, then use this signal to identify in-progress selective sweeps in the malaria vector Anopheles gambiae: www.biorxiv.org/content/10.1...

The chance of the broccoli-headed fascists reaching NIH and destroying online NCBI tools and datasets we rely on isn't 0%, so it's worth making a list of the mirrors/alts offered by EMBL-EBI, etc that many of us (including me) are unaware of. #bioinformatics #genomics #biology #evosky #molevol

Widespread use of azole fungicides in agriculture may reduce the effectiveness of antifungal treatments for patients with aspergillosis. EMA highlights that nearly all 120,000 tonnes of azoles sold in the EU were used as pesticides, potentially contributing to #AMR www.ema.europa.eu/en/news/one-...

Our study on #lichen #symbiosis is out in @currentbiology.bsky.social! How can multiple microbes create a large, 3D, and structurally complex organism? To answer this question, we used #metagenomics, #metatranscriptomics, and a bit of protein structure modeling 🧡1/7 🧬 πŸ–₯️ πŸ§ͺ 🦠 🧫 #SymbioSky

"fastmixture generates fast and accurate estimates of global ancestry proportions and ancestral allele frequencies" by Santander et al. in PCI Evol Biol #genomics #popgen evolbiol.peercommunityin.org/PCIEvolBiol/...

So it turns out that #NCBI SRA doesn't take pod5 raw files from Nanopore runs 🫠. Where are people putting their raw files then? #bioinformatics #Nanopore #genomics #sciencereproducibility #OpenScience

Where can I find examples of "Equality, Diversity and Inclusion" statements (to apply for faculty positions)? Any tips to not sound fake af, clichΓ©, or unoriginal? #PostdocLife #AcademicLife #ScienceCareers #DiversityInScience

Stoked about this manuscript, many years in the making. We present an original resource of ~700 highly curated plastid MAGs of marine pelagic algae. Among these we found a novel deep branching group of plastid genomes; we informally call them leptophytes www.biorxiv.org/content/10.1...

Reconstructing NOD-like receptor alleles with high internal conservation in Podospora anserina using long-read sequencing https://www.biorxiv.org/content/10.1101/2025.01.13.632504v1

We have a new paper out! "Chromosomal inversions mediated by tandem insertions of transposable elements." πŸ“ 🧬 www.biorxiv.org/content/10.1...

Join us online for Roger Butlin's retirement celebration on Jan 9 at 2pm GMT during the Population Genetics Group meeting. Enjoy talks and stories from his career. Link: https://us06web.zoom.us/j/83972880389?pwd=fJMFBFqOrcH3RuuCyrwVQnPej2a30X. #conference

Wow, first time hearing about this #genomics #bacteria #mutation www.nature.com/articles/s41...

We wrote a review in a slightly different, lighthearted style 😁. "Starship Discovery: A Collaborative Approach to Uncover Massive Transposable Elements" πŸš€πŸ§¬ Thank you and congratulations to the coauthors! #fungi #genomics #transposons #science #Podospora link.springer.com/chapter/10.1...

With more #MycoSky arriving here by the day, lets gather everyone and rebuild. Please let me know if I’ve missed out on you or anyone relevant πŸ„β€πŸŸ«πŸ˜Ž go.bsky.app/FYRJn6M

JOB ALERT! A fully funded PhD opportunity awaits at Uppsala University, Sweden, focusing on the evolution and biology of lichen photobionts. The position will involved field work, molecular lab work and data analyses (from meta-omics to pop genetics). #PhDposition www.uu.se/en/about-uu/...

πŸ₯°πŸ₯³

Ouch

DORA comes out strong in support of @elife.bsky.social, criticizing Clarivate, a multi-billion dollar multinational for-profit outfit, for holding the academic community "to ransom". sfdora.org/2024/11/25/c...

Hello Bsky World! Can somebody explain to me the difference between dN/dS and Ka/Ks?? I see some sources saying they are the same thing, but then I go and see papers where they use *both* terminologies. Does anybody have sources? Help! πŸ€” #genomics #PopGen #MolecularEvolution