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martinalexsmith.bsky.social
πŸ‘¨β€πŸ‘©β€πŸ‘§β€πŸ‘¦πŸŽ“πŸ¦ πŸŽ“πŸŽ“πŸ‘¨πŸ»β€πŸ’»πŸ§¬πŸ‘¨πŸ»β€πŸ«πŸ•οΈπŸ₯ΎπŸŽ£πŸš΄πŸ»β€β™‚οΈπŸŽΎπŸ’πŸΊβ˜• Director of Ramaciotti Centre for Genomics, Associate Professor at UNSW BABS, Faculty member of the UNSW RNA Institute, Affiliated Prof @ Umontreal & CHUSJ Research Centre
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Stephen presents a case study of a child with degenerative encephalopathy. Through the establishment of the n-lorem Foundation, they developed an ASO that cured the seizures after the first low dose, then Conor could walk again! First reversal a degenerative neurodevelopmental disease #AGBTGM

Talking about her experience as a rare cancer survivor, @corriepainter.bsky.social first confronted by abysmal prognosis following diagnosis, shifted scientific fields, secured a large grant, but pivoted again to focus on increasing the societal impact of angiosarcoma research #AGBTGM

@kstsosie.bsky.social summarizing the challenges of indigenous genomics and solutions thereto #AGBTGM

@jasmineplummer.bsky.social using #Illumina spatial to light up genomic dark matter, showing that the Tech's sensitivity facilitates the study of long non-coding RNAs IN prostate cancer #AGBTGM

After a CLR update, #Illumina now presenting advances in their single cell, 5-base solution, protein prep, spatial and connected multi-omics technologies #AGBTGM

Stephen Kingsmore from Randy's Children Institute for Genomic Medicine singing the praises of #Illumina constellation long reads for structural variant calling. Shown here, 700kb F8 gene involved in haemophilia A #AGBTGM

Very slick entrance to the Roche suite at #AGBTGM

@timcoorens.bsky.social diving into the Bostonian wing of the SMaHT program (a.k.a. 'wicked SMaHT), detailing new sequencing solution for ultra high accuracy duplex sequencing, essential for detecting somatic variation #AGBTgm

Richard Gibbs touching on the history of #AGBTGM before launching into 4 vignettes and expanding on some interesting somatic mosaicism cases, argues that we need more studies on non-malignant somatic variation. Also, refreshing to hear an Aussie accent in Florida!

@tuuliel.bsky.social delivered an impressive SmΓΆrgΓ₯sbord of functional variant studies, testing my caffeination level this morning! Showed that eQTL + CRISPRi studies are greater than the sum of their parts.

Richard Lifton, President of The Rockefeller University, summarizing interesting findings from large-scale Mendelian genomics projects. Mentions that some LoF variants show higher transmitted than expected, and that no more than 60% of observed genetic variation can be explained/interpreted #AGBTGM

Two awesome talks from the #AGBTGM abstracts: (1) Dewi Moonan (EMBL) showing results from a CRISPR screen of CIS regulatory elements across 2.7M activated primary human T cells

An overview of nanopore sequencing for pangenomes and hemi-hydroxymethylation in medaka fish brains by @ewanbirney.bsky.social Presenting results showing biased 5hmC/5mC hemimethylation at splice sites, and increased skewed hemimethylation across repetitive sequences.

David Altshuler from Vertex Pharmaceuticals showcasing their highly effective strategy of getting drugs to market using causative human biology/genetics with minimal marketing. Average time from discovery to market is ~7 years, versus 12y industry average #AGBTGM (1/2)

Bill Clinton giving an address to genome scientists to open up THE 25th #AGBTGM He highlighted how the $3B investment in the Human Genome Project yielded over $1T in economic benefits, not to mention all the biomedical discoveries. Reminds us that all humans are 99.5% identical and we act like it!

The one and only Matt Loose will be keynoting a long reads for cancer seminar in Sydney on March 17, also featuring local speakers Hugh French, David Ziegler, Luiza Steffens Reinhardt, Franki Tse, Marjan Naeini and yours truly. Register πŸ‘‰πŸ» events.humanitix.com/long-read-se...

Here's the contents of the #AGBTGM backpack (Swiss Gear) + shuttle bus welcome bag from 10X

3 flights and a couple days latter, time to rip the lid off #AGBTGM 🧬

Any #slug experts here? Trying to identify this funky #australian #invertebrate

Roche Ripple Predictions My take on how Roche SBX will roil the sequencing landscape omicsomics.blogspot.com/2025/02/roch... 🧬πŸ–₯️

Roche Xpounds on New Sequencing Technology My deep dive on this exciting new entrant omicsomics.blogspot.com/2025/02/roch... 🧬πŸ–₯️

A sneak peek at Roche’s nanopore sequencer. Really makes me wish I was going to #AGBT this year! #genomics #nanopore #sequencing sandiegomics.com/roche-has-en...

Who's going to #AGBT next week?

🌟 Client Publication Highlight! 🌟 We're proud to share a little summary of a recent study by Furnell et al (2024) who used the Ramaciotti Centre's long read (ONT) sequencing and Sanger sequencing services🧬

πŸ“† Save the date! The #AGTA2025 Australasian Genomic Technologies Association's annual conference will be in Sydney at the UNSW Roundhouse on October 13-15. Stay tuned for more details...