mdziemann.genomic.social.ap.brid.gy - Profile | ThreadSky

The Australasian Epigenetics Alliance continues tomorrow with a talk from A/Prof Siddharth Dey (University of California, USA) Title: ‘Developing integrated single-cell epigenome and transcriptome sequencing technologies to study early mammalian embryogenesis’ […] [Original post on genomic.social]

submitted 7 days ago • 0 comments

For a long time, telomeres (the fragile ends of our chromosomes) have been implicated in the aging process, but now we know that telomere length is determined by the health of mitochondria (energy producing parts of our cells) at fertilisation (in mice). These findings could be important in […]

submitted 9 days ago • 0 comments

From the Zachgo lab, an authoratative review of the evolutionary biology of sex in plants. 🌱 🌲 🌻 And the figures are just gorgeous! https://doi.org/10.1007/s00497-025-00522-4 #evolution #biology #plants

submitted 14 days ago • 0 comments

@paocorrales and I got a paper published! reproducibility.rocks has now been published in the Journal of Open Source Education. https://jose.theoj.org/papers/10.21105/jose.00260

submitted 29 days ago • 0 comments

Solid advice on keeping your SSH connections secure https://www.brandonchecketts.com/archives/ssh-ed25519-key-best-practices-for-2025

submitted 29 days ago • 0 comments

The headline that, in twelve words, tells you all you need to know about Trump and Russia. (From the Guardian web-site's front page.)

submitted 35 days ago • 0 comments

🔬 𝗛𝗲𝗹𝗽 𝗜𝗺𝗽𝗿𝗼𝘃𝗲 𝘁𝗵𝗲 𝗥𝗲𝗽𝗿𝗼𝗱𝘂𝗰𝗶𝗯𝗶𝗹𝗶𝘁𝘆 𝗼𝗳 𝗕𝗶𝗼𝗶𝗻𝗳𝗼𝗿𝗺𝗮𝘁𝗶𝗰𝘀 𝗧𝗼𝗼𝗹𝘀 𝗶𝗻 𝗕𝗶𝗼𝗺𝗲𝗱𝗶𝗰𝗮𝗹 𝗦𝗰𝗶𝗲𝗻𝗰𝗲𝘀 + 𝗪𝗶𝗻 𝗮 𝗩𝗼𝘂𝗰𝗵𝗲𝗿! 🎟️ My wonderful PhD student (not on fedi) is runnning a survey about researcher views about pathway enrichment analysis. If you are a life scientist who has […] [Original post on genomic.social]

submitted 45 days ago • 0 comments

The mitch R/Bioconductor package for enrichment analysis gets new network visualisation function in the devel branch. See these examples for how lung cells respond to C19 infection. Here red=up regulated, blue=down. Details and quickstart guide […] [Original post on genomic.social]

submitted 57 days ago • 0 comments

@ChrisO_wiki 1/ The principle of Trump's Razor is that all else being equal, the stupidest possible explanation is the most likely. This map provides the stupidest possible explanation for why Trump wants Greenland - it looks so much bigger than the US on a Mercator projection map.

submitted 59 days ago • 0 comments

All countries should expel USA soldiers and close their bases until they bring their foreign policy in line with international law #Japan #Germany #Australia #UK

submitted 60 days ago • 0 comments

Big shoutout to the folks at NCBI GEO. They have been doing an incredible job managing enormous amounts of gene expression and related biomedical data for many, many years They do it efficiently and very, very well. I am so grateful: both when I download data published by others and when I […]

submitted 62 days ago • 0 comments

What is it with these incompetent assholes in the Trump admin leaking classified info constantly and never getting punished for it?

submitted 65 days ago • 0 comments

California residents: If you (naively IMO) signed up for the "23andMe" genetic testing service, please understand that your data may soon be sold to an even more untrustworthy company -- but you can still order it deleted before it's too late […]

submitted 66 days ago • 0 comments

Actions of Trump make sense when you understand he's trying to sow chaos in order to declare a state of emergency. It is a trick used many times in history to remove any legal barriers to total control. https://newrepublic.com/article/192091/trump-emergency-rhetoric-autocratic-rule

submitted 79 days ago • 0 comments

If Ukraine is to win the war we need to support them in the total destruction of russian industry including oil infrastructure, weapons manufacturing, metallurgy and energy. This is how Nazi Germany was defeated.

submitted 87 days ago • 0 comments

🇺🇦🇨🇦 Canada will transfer a part of Russia’s frozen assets worth 5 billion CAD, including 25 LAVIII infantry fighting vehicles, 4 F-16 flight simulators, artillery shells, and more, in the coming months. - Justin Trudeau Prime Minister of Canada ♥️THANK YOU CANADA […]

submitted 93 days ago • 0 comments

Just saying... I think Kamala would have been a better choice.

submitted 95 days ago • 0 comments

the fact the US President can call Zelensky a "Dictator" on the same day he calls himself King is.... wild. Dear America, any time now... you should probably rise up against this guy. Right? Like... fire in the streets kinda thing. Right? You think Democracy and Freedom are important enough […]

submitted 98 days ago • 2 comments

Now isn’t the time to back down. 🇺🇦 needs our help now more than ever. I supported Liberty Ukraine with a donation https://www.libertyukraine.org/ #Ukraine

submitted 98 days ago • 0 comments

It turns out CPU L3 cache matters a lot for bioinformatics workloads https://genomespot.blogspot.com/2025/02/bioinformatiics-data-processing-power.html #Genomics #Bioinformatics

submitted 105 days ago • 0 comments

yeah, I would love to do that too! "Going Dark: Running a Tor relay and a dark web version of this site" https://doi.org/10.59348/p54v6-ses57

submitted 110 days ago • 0 comments

It is once again time to give thanks to Brian Fox, the Black American programmer that has given us BASH and `echo`! Thank you for your INCREDIBLE contributions to open source software, Unix, and Linux. It literally would not be the same without you […] [Original post on social.smallhack.org]

submitted 112 days ago • 9 comments

Just tried DeepSeek-R1-Distill-Qwen-32B model on my PC and noticed that it swapped into Chinese in one of my questions 😂 (1st screenshot) Q) If I knew a nuclear explosion was imminent in my city in 5 minutes and I was at home, what would be the best way to […] [Original post on genomic.social]

submitted 112 days ago • 0 comments

If you got some bandwidth to share and want to help archive the web, set up an ArchiveTeam Warrior docker. It will download stuff and upload it to the Internet Archive. They and I recommend to use "ArchiveTeam's Choice", but you can set it work on specific […] [Original post on social.luca.run]

submitted 113 days ago • 4 comments

Today thinking of Dr Nick Wong who passed away on the 3rd of February 2023 and who was a friend to many in the bioinformatics and life sciences community in Australia and NZ 🕯️

submitted 113 days ago • 0 comments

[Dave's Garage] Run Deepseek R1 at Home on Hardware from $250 to $25,000: From Installation to Questions https://youtu.be/e-EG3B5Uj78 #AI

submitted 113 days ago • 0 comments

To save the planet, we have to redirect efforts from "Just stop oil" to "Just stop fascism". Because if fascism is not stopped, any chance of saving the planet goes out the window.

submitted 117 days ago • 4 comments

New Chinese #AI model, Deepseek R1, explained by a retired Microsoft engineer https://youtu.be/r3TpcHebtxM

submitted 121 days ago • 0 comments

Let's see I'd Trump can actually stop the Russo-Ukraine war in 1 day...

submitted 128 days ago • 0 comments

Documenting the growth of our gene expression database DEE2. Continuing to put processed RNA-seq data in the public domain for education, biology and data mining https://genomespot.blogspot.com/2025/01/dee2-2025-updates-growth-and-development.html #Genomics #RNA

submitted 136 days ago • 0 comments

Libation: Liberate your Audible Audiobook Library https://github.com/rmcrackan/Libation

submitted 144 days ago • 0 comments

Summer weekend trip to Port Campbell 🏖️

submitted 144 days ago • 0 comments

Really interesting YT channel: What is Going on With Shipping? https://www.youtube.com/watch?v=Gy27qiKVCSI&t=17s

submitted 152 days ago • 0 comments

Happy Holidays to all the Bioinformaticians out there finishing that one last thing

submitted 156 days ago • 0 comments

Such a shame... a perfectly good scooter was destroyed. #fuckrussia https://www.bbc.com/news/articles/cm2ek388yxzo

submitted 162 days ago • 0 comments

The {tugboat} #RStats 📦 lets you "take a directory on your local computer and quickly generate a Dockerfile and Docker image that contains all the code and the necessary software to reproduce your findings." By Daniel Molitor, new on CRAN. https://www.dmolitor.com/tugboat/ tugboat "builds […]

submitted 170 days ago • 0 comments

Exciting news that the raspberry pi 500 is released. https://www.raspberrypi.com/products/raspberry-pi-500/

submitted 171 days ago • 0 comments

The year is 2024 and powerpoint presentations are still not portable between mac and windows, with font sizes and alignment completely unpredictable 🙃

submitted 171 days ago • 1 comment