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mheming.bsky.social
www.mheming.de
61 posts 50 followers 24 following
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@lionelhenry.bsky.social and I are so excited to finally announce Air - an extremely fast R code formatter! 🎉 With Air, you'll never need to worry about styling your #rstats code ever again. All you need to do is save, and Air takes care of the rest. www.tidyverse.org/blog/2025/02...

submitted 5 days ago • 18 comments

New #RStats X #nix blog post why we forked nixpkgs brodrigues.co/posts/2025-0...

submitted 9 days ago • 1 comment

bsky.app/profile/brod... new release of rix. Every #Rstats user interested in reproducibility should give rix a try. @brodriguesco.bsky.social created this great pkg and I put a lot of work into automatically fetching the remote dep of R GitHub pkg of a similar date. @tommytang.bsky.social

submitted 10 days ago • 1 comment

New release of rix on CRAN! rix generates Nix expressions which are then used by the Nix package manager to build reproducible #RStats development environments. Many new features in this release: 1/3

submitted 11 days ago • 1 comment

Agent mode (preview) is here for GitHub Copilot in VS Code! In agent mode in Copilot Edits, Copilot can now iterate on its own output, execute terminal commands, and even self-heal from runtime errors. Try it in VS Code Insiders: https://code.visualstudio.com/updates/v1_97#_agent-mode-experimental

submitted 18 days ago • 0 comments

🧵 Why are workflow languages like Snakemake essential for bioinformatics? Let’s explore their power in streamlining genomic data analysis.

submitted 18 days ago • 1 comment

Hey #Rstats! Tired of manually adding @importFrom all over your 📦 #Rpackage? Say hello to {autoimport}, now on CRAN! 🚀 It parses your code and adds the necessary tags automatically, at the function or package level. Less typing, more coding! 🔥 github.com/DanChaltiel/...

submitted 20 days ago • 1 comment

Version 1.97 of VS Code is out now with Copilot Next Edit Suggestions, Python no-config debugging, SVG image preview, and more! Full release notes: https://code.visualstudio.com/updates/v1_97 Here are some of the highlights… 🧵

submitted 20 days ago • 4 comments

These two box plots generate the same bar plot with very different data: an old post by Rafa. Open letter to journal editors: dynamite plots must die simplystatistics.org/posts/2019-...

submitted 38 days ago • 0 comments

like reproducibility? wanna contribute to open source? want to open PRs, and review PRs? wanna make the #RStats ecosystem great on #Nix / #NixOS ? join our matrix channel matrix.to#/#r:nixos.org and let's talk!

submitted 40 days ago • 0 comments

Analysis of multi-condition single-cell data with latent embedding multivariate regression www.nature.com/articles/s4... I know it is good if Wolfgang Huber is in the author list.

submitted 45 days ago • 1 comment

1/2 Every #rstats user, interested in #reproducible analysis should try the new version of #rix. It's much more robust than just using renv. With this update rix allows to use date specific versions and improves using github packages. bsky.app/profile/brod...

submitted 47 days ago • 1 comment

rix v0.14.3 is on CRAN with many new features and improvements! cran.r-project.org/web/packages... Thanks to the many contributors for this release (credited in the DESCRIPTION file) Here is a sneak peak of what awaits you: 1/4

submitted 48 days ago • 1 comment

Wonderfully comprehensive work by @clodida.bsky.social and Greg Wu on scRNA-seq immunophenotyping of CSF across a multitude of neurologic conditions. Congrats to all co-authors! jci.org/articles/vie...

submitted 55 days ago • 0 comments

Extensions are an integral part of VS Code - and now, Copilot functionality can be added to your extensions. See this in action with the GitHub Pull Requests extension, using Copilot to summarize issues/PRs. Available to everyone today with GitHub Copilot Free. Learn more: aka.ms/copilot-free

submitted 58 days ago • 1 comment

I am in the process of uploading our sequencing data from our PNS atlas to GEO. I struggle to find raw files for Xenium. @10xgenomics.bsky.social provides this nice list kb.10xgenomics.com/hc/en-us/art... but Xenium is missing.

submitted 60 days ago • 3 comments

Another great study by the colleagues from Münster Multi-omic characterization of human sural nerves across polyneuropathies | @biorxivpreprint.bsky.social www.biorxiv.org/content/10.1...

submitted 62 days ago • 0 comments

I created a @quarto.org markdown file that reproduces the figures of our PNS atlas manuscript. It's fully automated. It downloads all necessary data from #zenodo and can be run in the respective #Docker container. mihem.github.io/pns_atlas/ bsky.app/profile/mhem...

submitted 65 days ago • 2 comments

Friends, please help me test the latest development version of my #RStats package, rix: gist.github.com/b-rodrigues/...

submitted 67 days ago • 0 comments

#RStats I'm so, so thrilled to finally share the release of Rlinguo, a mobile app that runs R 📱 This is a fully, native mobile app that uses #webR in the backend to run R functions. Available on the App Store (iPhone) & Play Store (Android) rtask.thinkr.fr/introducing-...

submitted 70 days ago • 8 comments

Interested in #PainResearch and/or mural cells (#pericyte #BloodBrainBarrier)? This one may be for you! Our latest #neuroskyence research suggesting that cells at the blood nerve barrier may be particularly replete with pain-inducing substances 🧪 #painscience: www.biorxiv.org/content/10.1...

submitted 72 days ago • 1 comment

Building reproducible analytical pipelines with R raps-with-r.dev/

submitted 75 days ago • 0 comments

Exciting news! Our new paper is published at Annals of Neurology! Check it out to see how large-scale CSF and blood flow cytometry can reveal disease clusters to improve diagnosis and understanding t.co/JzIIUSuKVn

submitted 76 days ago • 0 comments

1/🚀 Excited to share RegVelo, our new cell model combining RNA velocity with gene regulatory network (GRN) dynamics to model cellular changes and predict in silico perturbations. Here's how it works and why it matters! 🧵👇 biorxiv.org/content/10.1101/2024.12.11.627935v1

submitted 76 days ago • 3 comments