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qiatcshl.bsky.social
Quantitative Imaging: From Acquisition to Analysis course at Cold Spring Harbor Laboratory / Posts by QI Instructors & TAs Applications due 1/31! https://meetings.cshl.edu/courses.aspx?course=C-QICM
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Analysis team cooking up some cellprofiler magic at @qiatcshl.bsky.social

Congratulations to students @nancypaniagua.bsky.social & Michal for placing 1st & 2nd place in our @ilastik-team.bsky.social pixel classifier challenge to segment with the least amount of annotations! #lazyannotationsftw

The students (totally) loved our TIRF lab! Check out this fluorescein solution sample we used to visualize internal reflection on the scope - πŸ“Έ by student Augusto Berrocal

Week 2! πŸ”¬πŸ–₯οΈπŸ“Š

Our image analysis expert instructors, @bethcimini.bsky.social, @damiandn.bsky.social, @florianjug.bsky.social & Hunter Elliott, are in full swing!

It's TIRF time again at QI!!! πŸŽ‰ πŸ”¬Check out @jencwaters.bsky.social's infamous TIRF demo to understand the principle behind total internal reflection vs refraction! #gonetirfing #criticallyawesome

Our openSPIM is officially up and running to image the latest catch of the day! Fueled by pymmcore-plus & pymmcore-gui! πŸ’ͺβš‘πŸ”¬ pymmcore-plus.github.io/pymmcore-plus/ github.com/pymmcore-plu...

Our openSPIM is officially up and running to image the latest catch of the day! Fueled by pymmcore-plus & pymmcore-gui! πŸ’ͺβš‘πŸ”¬ pymmcore-plus.github.io/pymmcore-plus/ github.com/pymmcore-plu...

I spy with my little eye...a sneak peek of our light sheet microscopy lab samples! Perks of being a @cshlnews.bsky.social course is access to lots of great sample collecting spots! #catchoftheday #tardigrades

4 out of 16 β€οΈβ€οΈβ€οΈπŸ”¬πŸ”¬πŸ”¬πŸ”¬πŸ”¬ @qiatcshl.bsky.social

Another wonderful @sciencedoodles.bsky.social creation!

After learning about PSFs, our students are excited about the best microscopy model system: beads! Thanks @leicamicrosystems.bsky.social, @nikonmicro.bsky.social, & ASI for supporting our course! #fluorescentbeads #TheBeadles

Our new course logo, by @sciencedoodles.bsky.social

Love this place… πŸ₯° @qiatcshl.bsky.social @cshlaboratory.bsky.social

Demonstrating how local environment impacts fluorescence πŸ”¬πŸ§ͺπŸ₯Ό@qiatcshl.bsky.social

Full calendar, great students, dedicated instructors & TAs, and nonstop learning! πŸ”¬πŸ–₯️ πŸ“Š#microscopybootcamp

QI 2025 student Federico, a computer scientist, oiling an immersion lens for the first time. πŸ’ͺ

@fedegasparoli.bsky.social is setting up our openSPIM in preparation for the light sheet lab next week. Pro tip: Stouts block light more effectively than lagers.

πŸ’» Announcing the Boston Bioimage Analysis Course β€” BoBiAC! Join us this July at Harvard Medical School in Boston for a 6-day deep dive into bioimage analysis with Python, hosted by the IAC and CITE. Apply by May 16th, 2025!

Team CITE has arrived!

We received 83 applications for QI this year❗❗❗ We’re in the final stages of selecting our 2025 students and getting super excited for the course! πŸ’»πŸ”¬πŸ“Š

πŸ”¬πŸŽ€ As pre-announced a few days ago... please let us proudly present to you: π‘΄π’Šπ’„π’“π’π•Šπ’‘π’π’Šπ’• - your ticket to imaging more, imaging more gentle, and/or imaging more efficient. πŸ”¬ doi.org/10.1101/2025... Like ❀️, repost πŸ”‚, and most importantly... please send feedback βœ‰οΈ our way! πŸ™

QI Alumni: QI wants to follow you! Post below or follow @qiatcshl.bsky.social & we'll follow you back! 😺 πŸ”¬ πŸ’» πŸ“Š

Quantitative Imaging From Acquisition to Analysis applications are due Jan 31! 2 weeks of total microscopy & image analysis immersion with me, @talleylambert.bsky.social, @bethcimini.bsky.social, @florianjug.bsky.social & Hunter Elliott! See comments... (1/5) meetings.cshl.edu/courses.aspx...

The Quantitative Imaging: From Acquisition to Analysis course at CSHL is now on Bluesky! Follow us for updates on future course dates and fun photos when the course is in progress. Applications for this years course (March 24- April 8) are due next week on Jan 31!