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saramitri.bsky.social
Microbial ecology and evolution | Professor at University of Lausanne | Theory | Experiments | Egyptian
42 posts 1,089 followers 366 following
Prolific Poster

We are recruiting @ox.ac.uk @dunnschool.bsky.social for a joint project between Kevin Foster's group and mine! Cluster hire of two postdocs interested in: 1) Mucosal immunology and oral vaccine development my.corehr.com/pls/uoxrecru... 2) Microbiology my.corehr.com/pls/uoxrecru... Please share!

🚨 The Whelan lab is currently recruiting for a 6-week summer undergraduate student as part of the Lister Institute's Summer Studentship scheme. 🚨 The student will work along side a Postdoc to study interactions between pathogens from the cystic fibrosis microbiome. More info & to apply please see:

First post: 🦠🌊Denitrification is the main nitrogen loss process, but how do microbes performing different steps coexist? We outline the rules governing this coexistence and explain why some denitrifiers are more abundant than others in the ocean. Check it out here: www.pnas.org/doi/10.1073/...

A friend included this anti-acknowledgement section on her PhD thesis. She also added the proposition: “Systematic bullying and undermining of girls and women in STEM starts early on and is the reason why they do not stay in science and related fields.” Absurd we still need to go through this 🧪👩‍🔬

When the @sib.swiss Roadshow Initiative works out, everyone wins: optimized travel, more scientific exchange, and a chance to catch top speakers across Switzerland—this time with Prof. Piyanun Harnpicharnchai on fungal communities & water quality. @saramitri.bsky.social @cbank.bsky.social

Community stability is usually assessed by invading single species from rare and measuring relative fitness. However does this hold up when multiple species invade from rare? We test this using our super stable microbial community 👇🏻

📢 Don’t miss the deadline ⚠️ 27 February ⚠️ to submit your abstract to the [BC]2 Basel #ComputationalBiology Conference. From #GeneExpression to #evolution or #biomedicine - we are waiting to learn more on your research projects at #bc2basel! 👉Submit your abstract now: tinyurl.com/49w6wthj

Moduler les rouages des cellules pour les comprendre 🧬 ⚙️ Spécialiste en #biologie #synthétique, Yolanda Schaerli a dans son viseur les #réseaux de #gènes qui orchestrent les fonctions des cellules. Mais aussi la relève scientifique. ➡️ www.unil.ch/news/1740472...

The Oxford U. Foster and Slack labs are hiring! A chance to work in bleeding edge microbiome science with some really great mentors @mucosalimmunology.bsky.social www.fosterlab.uk/vacancies

We are recruiting! We are looking for a PhD student to study rapid adaptation to stress in bacteria (shorturl.at/sr0Mj). Come join us in Barcelona!

📣Just 1 week left to apply for 2x 5-year researcher posts in experimental evolution #mevosky #microsky in @mermanchester.bsky.social @official-uom.bsky.social + 3-year research tech post www.jobs.manchester.ac.uk/Job/JobDetai... ERC project: how MGEs and defence systems control genome evoluton

1/3 🌍 We're hiring! The Medical Systems Biology Lab at Kiel University @uni-kiel.de is looking for a #PostDoc in #Metabolic #Microbiome #Modeling. Join us at one of Europe’s microbiome research hubs and push the boundaries of microbiome science! 🔗 jobs.uksh.de/job/Kiel-Pos...

A truly wonderful project from last year! I love how this poster turned out, and can't wait to share a closer look at the process of making it.

What determines the spatial structure of microbial communities? In our new review we discuss the factors and feedbacks that affect spatial patterning and methods to study them. Great collaboration w. @saramitri.bsky.social @adelpanta.bsky.social & @micsysecolab.bsky.social doi.org/10.1038/s415... 🦠

Two (!) perspective pieces published today involving people from our lab! @adelpanta.bsky.social on spatial patterning in microbial communities www.nature.com/articles/s41... and @salazarafra.bsky.social on microbial communities as evolutionary individuals www.sciencedirect.com/science/arti...

📣 Please share: We’re hiring a tenure-track Group Leader in Multicellular Systems to explore the molecular and cellular mechanisms driving the formation, maintenance, or destabilization of tissues, organs and organisms. Apply at: www.fmi.ch/education-ca...

🌟 Join Institut Pasteur as a Junior Research Group Leader 🌟 Explore host-microbe interactions in key areas like vaccinology, infectious diseases, neuro-immunology, and maternal health. 📅 Deadline: Feb 28, 2025 (few weeks left!) Apply now ⬇️

New paper out in ISME Journal. Social interactions between strains shape bacterial communities. However, their impact on community functioning is lower compared to basic strain identity features. @joskramer.bsky.social @alexfig.bsky.social @simonmarech.bsky.social academic.oup.com/ismej/advanc...

Two weeks left to apply for a postdoc position with the Slack group! Please spread the word!

We are looking for a postdoc in bioinformatics interested in broad questions about the ecology and evolution of host-associated microbiomes using social bees as model. Please share with potential candidates and if interested apply here: career5.successfactors.eu/career?caree...

After years of dedication, countless hours, and a passion for science—one major manuscript, three science communication articles, and one translated into Dutch! Science thrives when we share it with the world www.biorxiv.org/content/10.1... micro-bites.org/author/ghada... #soil_microbes ##SciComm

We have an open position PhD position in a project aiming to develop novel methodologies for phylogenomic reconstruction of plasmid evolution. See details and how to apply in the Ad. Candidates who will review the relevant literature (see Ad) have a higher chance to write a successful application.

We have one postdoc position open with the Alliance Interinstitutional Postdoc Program. 🎈Details and applications here: 👇 health-life-sciences.de/opportunitie... 🎈Deadline: March 28, 2025, 5 pm CET. 🎈Project #128

New paper from my group and the group of @kiranrpatil.bsky.social: Obligate cross-feeding of metabolites is common in soil microbial communities By Ghada Yousif @metagenomez.bsky.social with @swagatika.bsky.social @isamirgiri.bsky.social Sharvari Harshe et al. www.biorxiv.org/content/10.1... 🧵👇

Evolutionary theory suggests that plants are unlikely to warn other plants about herbivore attack, via routes such as shared fungal networks (the 'wood wide web'). www.pnas.org/doi/10.1073/... @tobykiers.bsky.social @tomwscott.bsky.social

Interested in microbial #metabolism, #mucosalbiology and #UTI? Then check out the open postdoctoral position in the Mucosal Immunology Group at ETH Zurich! NB: All applications must go via the ETH job portal: www.jobs.ethz.ch/job/view/JOP... Closing date: 24th Feburary 🧪🧫🔬

New preprint from the lab!! Check it out!

Applications for MEME are open! It's a research- and mobility-oriented Evolutionary Biology Master's Programme, where students have the opportunity to visit 4(+2) different universities in two years. Please spread the word! www.evobio.eu #EvoBio

Applications are open for a paid 8-week summer internship in biological sciences at Cambridge — a great way to see what postgraduate research is like: bit.ly/3hqFri4

Job opening for full professor and head of dept in infectious disease epidemiology and dynamics at @lshtm.bsky.social. Deadline 31st Jan: jobs.lshtm.ac.uk/vacancy.aspx...

The University of Bern is looking for a Tenure Track Assistant Professor in Mathematical or Computational Biology: www.nature.com/naturecareer...

Beautiful work by @olimeacock.bsky.social showing how interactions between species can change in predictable ways if they are mediated by changes to the environment. We hope this framework proves useful for linking between gLV and CR models and testing ecological hypotheses! Congratulations Oli!! 👏

Join us in Stockholm. 3 TT positions now open in Biodiversity, very broadly defined. Hires will be affiliated with SciLifeLab to build up their biodiversity community. Position could be placed at one of several departments on SU campus. Read more: #evolution 🧪 #evodevo www.su.se/english/news...

I second the recommendation to attend the Alma Dal Co school. It looks fantastic! 🤩

🚨 PhD opportunity 🚨 The Whelan lab, along w @brockhurstlab.bsky.social, are looking for a PhD student w bioinformatic experience/interest to investigate the evolution of transmissibility in bacterial pathogens, with a focus on P. aeruginosa. More info & link to apply below. Please spread the word!

I'm recruiting! I'm looking for a motivated postdoctoral scientist to join my new team at SCELSE in Singapore. The role will explore various aspects of how #eDNA is produced and utilised in #Pseudomonas aeruginosa biofilms. #Microsky #phagesky #Science ntu.wd3.myworkdayjobs.com/Careers/job/...

We're looking for an Assitant Professor in Microbiology to join us @tcdgenmicro! Come and join our growing team. www.tcd.ie/microbiology... www.tcd.ie/hr/vacancies/ Job ID: 037876. Closes 31st January

Excited to share our study led by @SakenovaNazgul! We used chemical genetics to identify and understand cross-resistance & collateral-sensitivity (CS) between antibiotics and reduced AMR development with CS drug pairs @embl.org with @camille_goemans @EPFL_en www.nature.com/articles/s41...

For anyone interested in #evolution #virulence #gutmicrobiome I have a new perspective with Bruce Levin and Fernando Baquero just out @pnas.org www.pnas.org/doi/abs/10.1...

PhD studentship alert! Fully funded, co-supervised with @rokkrasovec.bsky.social and Prof Mike Bromley, University of Manchester Exploring routes of horizontal gene transfer in pathogenic fungi Exciting project, will be a bunch of fun! Come & join us 🔬 www.findaphd.com/phds/project...

I'm advertising several positions at all levels ( #PhD, #Postdoc, #RA). If you're enthusiastic, collaborative, and interested in the #ecological and #evolutionary dynamics of #infection, please get in touch - link below. pedrovale.bio.ed.ac.uk/open-positions ([email protected])

A nice perspective piece proposing that collective microbial metabolism is underpinned by selection for proteome efficiency - www.nature.com/artic...