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simonduerr.eu
Assistant Professor UAS at HES-SO Valais-Wallis 🇨🇭 🤗 HF Fellow. Working on AI, Protein Design and Open Science. Creator of bioicons.com
46 posts 1,712 followers 1,218 following
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CC BY is great but also requires that we replace some of our tools. Many currently published CC BY papers are actually not fully CC BY because of BioRender www.chemistryworld.com/news/thousan...

submitted 70 days ago • 1 comment

Excited to share our new AllMetal3D model building on Metal3D. AllMetal3D predicts the location, identity and geometry of the major biologically relevant metal ions doi.org/10.1101/2025...

submitted 108 days ago • 1 comment

It’s been a tough few weeks. My 10yo daughter was diagnosed with a very rare, aggressive cancer called interdigitating dendritic cell sarcoma (IDCS). I’m reaching out to identify clinicians/patients who have encountered pediatric IDCS or other (non-LCH) dendritic or histiocytic sarcomas cases.

submitted 109 days ago • 82 comments

MLSB happening today! Packed room at @neuripsconf.bsky.social East Building Rm 11-12 @workshopmlsb.bsky.social

submitted 164 days ago • 0 comments

Re docking: @workshopmlsb.bsky.social has been piloting a leaderboard for the PLINDER benchmark. It would be awesome to get submissions using existing methods, then everyone can see comparisons better 😁 leaderboard & instructions are on mlsb.io

submitted 170 days ago • 1 comment

Unbelievable how expensive BioRender is. The Max Planck Digital Library is paying 673 413 USD for a two year license for a software that isn't even compatible with open access publishing (even if BioRender claims otherwise). ted.europa.eu/en/notice/-/...

submitted 184 days ago • 2 comments

Now available: open source UI with @Gradio for Boltz-1 by @gcorso.bsky.social @jeremywohlwend.bsky.social Check it out on HuggingFace spaces. h/t @huggingface.bsky.social for community L4 GPU: huggingface.co/spaces/simon...

submitted 188 days ago • 0 comments

Gave an intro to Docker + HuggingFace Spaces + Gradio at European Rosettacon 2024 for protein people. Maybe my slides are also interesting to the wider community: duerrsimon.github.io/docker_huggi...

submitted 195 days ago • 0 comments

More than 9000 studies published in open-access journals contain figures created using the commercial scientific illustration service BioRender, which should technically mean that they are available for free reuse. But that doesn’t appear to be the case. www.chemistryworld.com/news/thousan...

submitted 213 days ago • 0 comments