yeastgenome.bsky.social - Profile | ThreadSky | a Reddit-style client for Bluesky

The Pacific Northwest Yeast Club is holding their annual meeting on June 20th, 2025 in beautiful Vancouver, Canada! There are only 100 spots and registration is open now: www.pnwyc.net

submitted 4 days ago • 0 comments

New SGD paper! Saccharomyces Genome Database: advances in genome annotation, expanded biochemical pathways, and other key enhancements academic.oup.com/genetics/art...

submitted 5 days ago • 0 comments

Friendly reminder that community resources like SGD rely on your usage and citation for continued funding. Make sure to follow the citation guidelines and include in-text citations, not just links. #modelOrganism

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Apply by March31 for the 2025 Yeast Genetics and Genomics Course Jul22–Aug12 www.yeastgenome.org/blog/apply-n... This year’s instructors –Grant Brown, Soni Lacefield @lacefieldlab.bsky.social, and Greg Lang– have designed a comprehensive course covering all things yeast from genetics to genomics!

submitted 13 days ago • 0 comments

Article by Dr. Kurt Williamson, Biology at #William&Mary: "I work with undergraduate students at the very beginning of their professional careers. The loss of training and support of new and early-career scientists is a particularly hard blow that will affect all of us for years to come."

submitted 19 days ago • 0 comments

FEBS Workshop 2025 – Conservation and diversity of gene regulatory mechanisms across eukaryotes 16–20 June 2025 │ Sant Feliu de Guixols, Spain Deadlines: Registration closing: 15 March 2025 Abstract submission: 15 March 2025 community.alliancegenome.org/t/febs-2025-...

submitted 27 days ago • 0 comments

Join #Ensembl, #FungiDB / @veupathdb.bsky.social, @yeastgenome.bsky.social / #CGD and #MycoCosm / @jgi.doe.gov at this year's Fungal Pathogen Genomics course organised by @eventswcs.bsky.social 🍄🧬💻 Applications close on Tue, 18th March 2025 📆 2nd to 6th June 2025 📍 Virtual ℹ tinyurl.com/fpg2025

submitted 39 days ago • 0 comments

From the 52 Biodata resources listed on the GCBR website globalbiodata.org/what-we-do/g... 24 exist in the US, and of those, 12 are NOT mirrored, officially. Of these 52 resources, 29 are supported by the NIH. If Trump/Musk continue, we are FUBARed! #Bioinformatics #Genomics #SciPo 🧬 🖥️ 🧪

submitted 44 days ago • 2 comments

YEAST2025: 32nd International Conference on #Yeast #Genetics and Molecular #Biology Sorbonne Université, Paris, France ICYGMB32, July 21-24, 2025 premc.org/yeast2025/

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Giving to SGD just got easier! We now accept donations by credit card with this form: give.stanford.edu. Select ‘Other Stanford Designation’ under ‘Direct your gift’ & in the ‘Other’ box, add: Saccharomyces Genome Database-Account:GHJKO, Genetics:WAZC. Thanks for your support!

submitted 53 days ago • 0 comments

CSH Asia: Yeast and Life Sciences Suzhou, China June 2-6, 2025 Abstract deadline: March 28, 2025 www.csh-asia.org?content/2721

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Yeast Genetics & Genomics at CSHL July 22 - August 12, 2025 Application Deadline: March 31, 2025 Arrival: July 22nd by 6pm EST Departure: August 12th around 12pm EST For more info and to apply please visit the Yeast Genetics & Genomics course website: meetings.cshl.edu/courses.aspx...

submitted 66 days ago • 0 comments

If you are using bots to scrape SGD, please stop. You are overloading the database and adversely affecting other users.

submitted 68 days ago • 0 comments

Global Biodata Coalition is profiling SGD this week! Click to learn more about SGD's impact on scientific research - bit.ly/3W7XdI9

submitted 75 days ago • 0 comments

EXTRA! EXTRA! Read all about it! Latest SGD newsletter! www.yeastgenome.org/blog/sgd-new... - AlphaFold - YeastMine - Community wiki - SGD’s new GENETICS publication - New yeast microPublications - Alliance of Genome Resources 7.4 - Give a Gift/Support SGD - Upcoming conferences - Happy Holidays!

submitted 101 days ago • 0 comments

Announcing microBREW 2025: a free online webinar on assessment of undergraduate experiential learning in biology labs! We are seeking abstracts for lightning talks; more information on registration soon. Info and abstract submission on our website: brewmor.org/microbrew-20...

submitted 124 days ago • 1 comment

The Global Biodata Coalition has an open letter campaign to show support for sustainable funding for biodata resources. Please take a minute to read and sign globalbiodata.org/open-letter-...

submitted 112 days ago • 0 comments

Global biodata resources are at risk - funding models are fragile and unsustainable. GBC's open letter campaign needs your support to call for solutions. Science leaders have already signed the letter, please join them. Click here for more: globalbiodata.org/open-letter-...

submitted 123 days ago • 0 comments

AlphaFold protein structures now on SGD protein pages, now you can explore these comprehensive structural predictions directly within SGD for your favorite #yeast proteins check it out: www.yeastgenome.org/locus/set1/p...

submitted 126 days ago • 1 comment

❓ GO puts the FUN in function, yes - but what is phenomenal for phenomics??? ➡️ uPheno! Read more about the fantastic Unified Phenotype Ontology here: community.alliancegenome.org/t/ever-neede...

submitted 166 days ago • 1 comment

Due to ongoing funding cuts, SGD is trimming unused services. Next up is the SGD Community Wiki: wiki.yeastgenome.org/index.php/Ma.... We will move some of the pages to the SGD Help site: sites.google.com/view/yeastge... Donations are now critical for us to continue. More info: www.yeastgenome.org

submitted 171 days ago • 0 comments

Do you use GO GPAD files? Although mostly used for internal purposes, if you use GPAD files please be aware the format is getting an update to GPAD 2.0 and this is a breaking change. Details at community.alliancegenome.org/t/go-file-fo...

submitted 255 days ago • 0 comments

Ever see a #GeneOntology annotation that doesn't use a PMID as a reference, but instead has GO_REF: and a bunch of numbers? Find out what a GO_REF is & where to find full descriptions of them in this week's Alliance Forums post: community.alliancegenome.org/t/whats-a-go...

submitted 206 days ago • 0 comments

SGD distributes data via the SGD Downloads site: sgd-archive.yeastgenome.org For info regarding genes see the Chromosomal_features directory. For annotations, see the Literature directory. To access SGD Downloads, click on ‘Download’ in the black toolbar running across the top of SGD webpages.

submitted 223 days ago • 0 comments

YeastMine shutting down July 15: Due to ongoing cuts to our funding, SGD can no longer continue to provide the YeastMine data warehouse resource. It is with heavy hearts that we discontinue this service. community.alliancegenome.org/t/yeastmine-... #yeast

submitted 266 days ago • 0 comments

#Yeast as #art! www.yeastart.org/super-yeast

submitted 276 days ago • 0 comments

#Yeast Reference #Genome Annotation Update R64.5: new ORFs: YDL204W-A, YFR035W-A, YGR016C-A, YMR106W-A, YNL040C-A, YNL155C-A new uORFs for existing ORFs: ATG12, ATG19, ATG5, ATG13 move start downstream: EFM4 ORF upgraded from Dubious to Verified: YIL059C www.yeastgenome.org/blog/referen...

submitted 278 days ago • 0 comments

Give a Gift / Support SGD! Budget reductions and inflation continue to strain SGD's finances. Despite our efforts, we continue to have significant budgetary challenges. Donations are now critical for our work to continue.

submitted 284 days ago • 0 comments

2024 BREWMOR (Bridging #Research and #Education with Model ORganisms) workshop “AI: Friend or Foe? How to work with AI in the #classroom” Co-sponsored by the Genetics Society of America (GSA) Virtual: July 25 talks, July 26 workshop Register: bit.ly/bigBREW_2024 Abstract deadline: June 21

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The Pacific Northwest Yeast Club is meeting on July 26! Submit to present your work at www.pnwyc.net. Deadline is June 7!

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#Yeast ORFan #Gene Project - Gene #Expression Analysis Workshop - June 20-21, 2024 Online yeastorfanproject.com

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Application deadline for 2024 #Yeast #Genetics and #Genomics Course has been extended to April 22! Significant financial aid may be available for trainees applying, covering up to 50% of the cost of the course - check it out! community.alliancegenome.org/t/deadline-e...

submitted 349 days ago • 0 comments

🚨New @alliancegenome.bsky.social paper is out in the latest issue of GENETICS! Check out the latest updates from GO & the MODs of the Alliance 🧪 community.alliancegenome.org/t/new-allian... @yeastgenome.bsky.social @flybase.bsky.social @ratgenome.bsky.social 🐭🪱 🐸 🐠 (& @reactome.bsky.social !)

submitted 355 days ago • 0 comments

New user interface for YeastMine (same data!) We have updated YeastMine to use the new BlueGenes user interface from InterMine. The new interface provides the same functionality, more interactive experience for exploring and analysis. www.yeastgenome.org/blog/new-use...

submitted 354 days ago • 0 comments

Older working Lawrence Instruments (Hayward CA) manual micromanipulator & mechanical stage available to a good home. Likely needs tune-up. Used to dissect 1000s of tetrads. User would need a simple compound microscope with a stationary stage. Serious inquires only. Contact Alan, [email protected]

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A day on the Hill advocating for funding for scientific research #GeneticsOnTheHill #fundNIH #fundNSF #TAGC24

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SGD is getting ready for #TAGC24! Hope to see you there! #yeast

submitted 388 days ago • 1 comment

Thursdays are for tutorials! Here's a step-by-step of how to use @yeastgenome.bsky.social 's YeastMine to get the complete Term Name, Definition, and GO ID if you only have the ID or Term Name: community.alliancegenome.org/t/mapping-go...

submitted 396 days ago • 0 comments

SGD has modified the saccharomyces_cerevisiae.gff file that we provide to comply with JBrowse 2 requirements. Get all the details about the changes here: bit.ly/SGD_GFFupdates

submitted 388 days ago • 0 comments

Yeast Chromosome Biology and Cell Cycle June 23-27, 2024 Winnipeg, Manitoba #YCSRC community.alliancegenome.org/t/faseb-yeas... Focus: Structure, replication, segregation of chromosomes, and cell cycle regulation using yeast model systems to understand genome maintenance and its link to disease.

submitted 397 days ago • 0 comments

GO has always had a great relationship with the yeast community, and Celebic et al. just published a great paper about investigating phosphoregulation in yeast! 🍺🥖🍷🧪 Find the open access paper from our Forum: community.alliancegenome.org/t/go-analysi...

submitted 406 days ago • 0 comments

Apply by March 31 for the 2024 #Yeast #Genetics and #Genomics Course at CSHL, which runs July 23 – August 13 and will provide a comprehensive education in all things yeast, from classical genetics through up-to-the-minute genomics. www.yeastgenome.org/blog/apply-n...

submitted 405 days ago • 0 comments

Registration and abstract submission is now open for SMYTE 2024! SMYTE 2024 will be on Aug 28-Sept 1, 2024 at the University of York, UK. Register here: www.smyte2024.com.

submitted 411 days ago • 1 comment

Some GO terms are incredibly specific, and some are quite vague. Did you know even seemingly non-descriptive terms like `GO:0005488 binding` have an important purpose? 🧪🔬🌾🦠 community.alliancegenome.org/t/usage-note...

submitted 413 days ago • 0 comments

Open Access: Riboproteome remodeling during quiescence exit in Saccharomyces cerevisiae community.alliancegenome.org/t/open-acces... #yeast

submitted 423 days ago • 0 comments

What goes better together than GO & hagfish? That's right, GO, PANTHER and hagfish!! 🧪 community.alliancegenome.org/t/go-and-hag...

submitted 426 days ago • 0 comments

The first release of 2024 is here! The January 2024 GO Release (2024-01-17) is now available. current.geneontology.org release.geneontology.org/2024-01-17 10.5281/zenodo.10536401 Find the details at community.alliancegenome.org/t/january-20... 🧪

submitted 427 days ago • 0 comments

Ever wonder if GO can help with metabolomics? Mahajan et al. have developed a tool for GO analysis of a metabolite list. Read more at community.alliancegenome.org/t/go-gene-fu... 🧪

submitted 430 days ago • 0 comments

ICYMI: GO-CAMs are now viewable directly on the appropriate gene product page in AmiGO! Want to know more, or not even sure what a GO-CAM is? Details on the Alliance Forum: community.alliancegenome.org/t/go-cams-vi... 🧪

submitted 431 days ago • 0 comments