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cyanophage.bsky.social
Cyano lover, working on Cyanobacteria-cyanophages dynamic, bloom toxicity prediction, cyano microbiome. Evolutionary ecologist, fake-bioinformatician & author of children book.
28 posts 1,180 followers 672 following
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Posts 45 Comments 5

Very excited to present the Great Barrier Reef Microbial Genomes Database (GBR-MGD), a comprehensive DB of 1000s of high-quality prokaryote, virus, plasmid, and chromosome-level eukaryote MAGs using Nanopore long reads. Subthreads incoming. Please share widely. 🙂 www.biorxiv.org/content/10.1...

submitted 13 days ago • 2 comments

Distinguishing among evolutionary and ecological processes shaping microbiome dynamics #ISMEJournal review by Tiffany N Batarseh and @bkoskella.bsky.social academic.oup.com/ismej/advanc...

submitted 10 days ago • 2 comments

Trump plans to eliminate most of our National Parks. Interior Secretary Doug Burgum will be promoting this plan at the Senate on Tuesday.

submitted 16 days ago • 21 comments

I think I still prefer when Tony Parker was rapping ... As realstate investor, he really has no vision. www.francetvinfo.fr/sports/sport...

submitted 25 days ago • 0 comments

All of US virology research is threatened by this executive order https://go.nature.com/4k0D3ZO

submitted 27 days ago • 5 comments

Host identity drives the assembly of phytoplankton microbiomes across a continental scale environmental gradient academic.oup.com/ismej/advanc... #jcampubs

submitted 34 days ago • 0 comments

#eDNA #eRNA #omics people: would you support the formation of a European Society for Environmental Omics #ESEO? Please share your thoughts in the questionnaire & spread this message! 🙏 Thank you, the ESEO core team! docs.google.com/forms/d/e/1F...

submitted 35 days ago • 1 comment

Assemblies of long-read metagenomes suffer from diverse errors https://www.biorxiv.org/content/10.1101/2025.04.22.649783v1

submitted 40 days ago • 0 comments

High-quality metagenome assembly from nanopore reads with nanoMDBG https://www.biorxiv.org/content/10.1101/2025.04.22.649928v1

submitted 40 days ago • 0 comments

I know I'm sharing to mainly other scientists, but please reshare this with others who aren't scientists so more people know what's at stake.

submitted 40 days ago • 0 comments

🏆 @rollingstone.com wins the Headline of the Day Award This is how it’s done. At least someone understands the assignment. www.rollingstone.com/politics/pol...

submitted 50 days ago • 911 comments

CoverM is published! CoverM: Read alignment statistics for metagenomics academic.oup.com/bioinformati... #jcampubs

submitted 55 days ago • 1 comment

Gene editing and many other useful biotechnology tools came from studies of bacteria fighting off viral invaders. But scientists have only begun to unlock the secrets of this ancient arms race https://go.nature.com/3XWPX2C

submitted 53 days ago • 0 comments

🆕 Funded #PhD with Dr Chris Quince at the Earlham Institute and @quadraminstitute.bsky.social, working on understanding the mechanisms of faecal #microbiome transplantation, with major potential impact to the treatment of IBD. buff.ly/ZaWxIZI #microbiomeresearch @mmbdtp.bsky.social

submitted 60 days ago • 0 comments

New preprint (and brief🧵)! “Co-occurrence drives horizontal gene transfer (HGT) among marine prokaryotes”. doi.org/10.1101/2025...

submitted 64 days ago • 1 comment

Nice one (in French) : www.lapresse.ca/actualites/c...

submitted 67 days ago • 0 comments

Microbial community structure is affected by phage-resistance associated increases in host density @femsjournals.bsky.social Microbiol Ecol by @mcastd.bsky.social, @padpadpadpad.bsky.social, Rai Lewis and Angus Buckling academic.oup.com/femsec/advan...

submitted 73 days ago • 0 comments

How metaG could help to identify toxigenic Cyanobacteria - especially when blooms are persistent. www.sciencedirect.com/science/arti...

submitted 74 days ago • 0 comments

Closing ceremony of #aquaecomics meeting!! Thanks to all of you for being there!

submitted 75 days ago • 0 comments

Really not easy to take a photo of the entire group ;-) #aquaecomics

submitted 75 days ago • 0 comments

Last AquaEcOmics day: Great talk from our keynote speaker Silvia Acinas (ICM-Barcelona)on Tara Ocean polar data and the quite unique MAGs composition!

submitted 75 days ago • 0 comments

Silvia Acinas AT CSIC ICM presenting impressive results from the Tara polar expeditions. Lots of unknown taxa, bigger genomes v temperate waters, 60% MAGs with polar distribution (as opposed to bipolar ie both Arctic and Antarctic) at #Aquaecomics d3

submitted 75 days ago • 1 comment

Great opening of #aquaecomics meeting given by Isabelle Domaizon #evian #omics #metabarcoding #eDNA #metagenomics #water… We are 240 attendees on site and 40 online! With more than 120 presentations and 40 posters aquaecomics.symposium.inrae.fr

submitted 77 days ago • 0 comments

Ramiro Logares @ramalok.bsky.social talking about the importance of marine microbes (the absolute keystones of life imho) and how time series like the BBMO and global expeditions like Tara are fundamental for better understanding ecology and adapta to climate change, #Aquaecomics d2

submitted 76 days ago • 1 comment

@kamilhupalo.bsky.social introducing the „fish smoothie approach“ for detecting fish parasites! #AquaEcOmics @aquaecomics.mastodon.social.ap.brid.gy

submitted 77 days ago • 0 comments

Today in #Aquaecomics, my amazing colleague in @azti.bsky.social Leire Garate presented our work using time series to study the temporal stability, potential interaction structure and effects of human pressures on those, in estuary sediment microbe communities. #microbialEcology

submitted 76 days ago • 0 comments

Fantastique talk from Benjamin Marie on Microcystis ecotype/metabotype! #Aquaecomics

submitted 76 days ago • 0 comments

AquaEcOmics Second day: Amazing talk from Florian Altermatt - our second keynote speaker - on how using eDNA to characterize global biodiversity. Super cool to link terrestrial and aquatic system! #Aquaecomics

submitted 76 days ago • 0 comments

Great talk on Microcystis phycosphere from Nicolas Creusot. New potentially complementary pathways found! #aquaecomics

submitted 77 days ago • 0 comments

Great talk from Valérie Langlois on eDNA standards and iTrackDNA activities. #Aquaecomics

submitted 77 days ago • 0 comments

AquaEcOmics first day: awesome talk from karoline Faust! Microbetag looks great. #Aquaecomics #microbialNetwork

submitted 77 days ago • 0 comments

Are you interested in the distribution of microbes, viruses, and #phages throughout the Microverse? Come and do a #bioinformatics PhD with us @microverse.bsky.social @uni-jena.de: jobs.uni-jena.de/jobposting/b...

submitted 78 days ago • 0 comments

In three days we'll be meeting in Evian 🙂 #aquaecomics meeting is coming!! #evian #omics #metabarcoding #eDNA #metagenomics #metabolomics

submitted 81 days ago • 0 comments

C'est chouette d'aimer le post, et c'est encore mieux de le diffuser ;-)

submitted 84 days ago • 0 comments

The symbiotic Nostoc strain PCC 73102 gives up its autonomy under inorganic carbon limitation. Please find our latest study here: rdcu.be/ecRjj

submitted 85 days ago • 1 comment

Happy International Women's Day I made a Women In Phage Research starter pack (+ me because I dont know how to remove me) Please share & let me know who to add #phagesky #microsky #microbiomesky 🧬🖥️🔬 go.bsky.app/BGugi2N

submitted 87 days ago • 13 comments

Défendre la science avec mes formidables collègues français. Merci USMB-INRAE-CARRTEL pour votre hospitalité et votre soutien! @inrae-france.bsky.social @rosaliebruel.bsky.social @herverogissart.bsky.social @jean-guillard.bsky.social @cyanophage.bsky.social @allanraffard.bsky.social

submitted 88 days ago • 0 comments

#Standupforscience CARRTEL (INRAE)

submitted 88 days ago • 1 comment

Wrote up a few pages to provide information about the Stand up for science rally. The goal was to do this in a as non-partisan way as possible and contextualize this to my specific location and institution. Feel free to use and share! #standupforscience docs.google.com/document/d/1...

submitted 88 days ago • 2 comments

Wow Just Wow youtu.be/G8ECt04qPos?...

submitted 92 days ago • 5 comments

🚀 Thrilled to share our latest work from Zhang Lab, now published in Science (www.science.org/doi/10.1126/...) We introduce TIGR-Tas, a PAM-free, compact, modular RNA-guided DNA-targeting system in prokaryotes & their viruses. More details coming soon 👀 #TIGR #RNA #GeneEditing #CRISPR

submitted 95 days ago • 1 comment

Trump and Vance needed to create an incident to provide a justification for their pre-planned abandonment of Ukraine now, then separation from NATO in the near future. That’s what that was all about, and that was always the way a second Trump term was going to go.

submitted 95 days ago • 1131 comments

Based on the science, diversity matters. www.nature.com/articles/s43...

submitted 95 days ago • 0 comments

Congratulations to @emmiamueller.bsky.social on: "Residence time structures microbial communities through niche partitioning" Now out in Ecology Letters: onlinelibrary.wiley.com/doi/10.1111/...

submitted 96 days ago • 0 comments

Deciphering the dynamics of Cyanobacteria-Phage in a natural lake: Insights from a decade-long investigation www.biorxiv.org/content/10.1... #jcampubs

submitted 98 days ago • 0 comments