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scienthusiast.bsky.social
Proteomics, Mass Spectrometry
254 posts 548 followers 220 following
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It's like he had no bones .. didn't expect the guards to dance 😂
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"..no stresso no stresso no need to be depresso.."
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Guess the next episode is finalized then ...?!
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Are they coming with an updated version (free) of Marker View? This would otherwise force their users to buy a licensed version.
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CVs are an important part of the validation process. However, it's possible to be measuring the wrong thing with precision. These assays need to provide data validating the specificity and linearity in addition to specificity. academic.oup.com/clinchem/adv...
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Cool!
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Congrats and welcome to loads of fun!🎉 Can I ask what LCs are they being paired with?
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'faster LC compatibility' meant shorter transients 🤔, would be great if it improves on points per peak from the current fast gen MS!
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It is indeed like a treasure hunt, uniprot is the low hanging fruit, although I do like it for the available proteomes, but getting the unconventional proteomes fasta and to figure out the right hits is indeed fun
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Try it yourself! 🔗 GitHub: github.com/instadeepai/... 🔗 Website: www.instanovo.ai 🔗 Blog: www.instanovo.ai/blog 🔗 Hugging Face demo: huggingface.co/spaces/Insta...
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Isn't identifying proteins different from sequencing proteins, but this article keeps mentioning it as sequencer? de novo peptide sequencing and protein sequencing... and while at it, what about prediction ? Or am I getting bogged down on semantics 😁
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In the meantime, if anybody needs any assistance currently with their mass spec proteomics project design, method review, data analysis, or result interpretation, please feel free to reach out.. It would be my pleasure to be of assistance.. I am also available for consulting/freelancing.. 5/6
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Skimming through the methods, how come it is an MRM fragmentation spectra..
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This is cool, a small in-house musuem :)
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..was looking for something without having to export within the software. Ideal one is to have it in the search template but would be nice to edit/filter it later..in case it's missed prior to search
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That's so clearly laid out..cool!
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That's cool.. sure, yeah, better sequence coverage helps.
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Is the protein of interest among the abundant ones/ sufficiently enriched in the 4000 identified