My #BioimageTooloftheDay is the fantastic AFT-Alignment tool
https://www.frontiersin.org/journals/computer-science/articles/10.3389/fcomp.2021.745831/full
https://github.com/OakesLab/AFT-Alignment_by_Fourier_Transform
We used the Python implementation to study actin stress fibers organisation in endothelial monolayers
https://www.frontiersin.org/journals/computer-science/articles/10.3389/fcomp.2021.745831/full
https://github.com/OakesLab/AFT-Alignment_by_Fourier_Transform
We used the Python implementation to study actin stress fibers organisation in endothelial monolayers
Comments
is the fantastic Introduction to Bioimage Analysis book by Pete Bankhead
https://bioimagebook.github.io/index.html
Because seriously, this is awesome
Also how can you get started without a good book
It's an awesome annotation tool to do manual segmentation of 3D FIB-SEM dataset. While we cannot quite afford the pro version, the free version will already take you far.