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suinlee.bsky.social
Paul G. Allen Endowed Professor in the Allen School of Computer Science & Engineering at the University of Washington. Interested in AI/ML, computational biology, and AI in medicine. https://suinlee.cs.washington.edu/
41 posts 2,882 followers 1,152 following
Prolific Poster

Allen School professor Amy X. Zhang receives Sloan Research Fellowship for empowering users to make ‘our online spaces as rich and varied as our offline ones’ news.cs.washington.edu/2025/02/24/a...

STAT story is up about study section restart. www.statnews.com/2025/02/24/s...

Check out LUNA by my colleague @mariabrbic—a generative AI model that reassembles tissues from dissociated cells! 🚀🔬 A potential game-changer for single-cell & spatial transcriptomic, IMHO!

Thrilled to share LUNA🌕 – our new generative AI model that reassembles tissue structures from dissociated cells! LUNA learns spatial priors over existing spatially resolved datasets with the aim to predict cell locations de novo. Check out our paper here: www.biorxiv.org/content/10.1...

Our new paper describing a scalable approach for training sequence-to-function models on personal genomes ("personal genome training"), includes our observations on when this works and its limitations. www.biorxiv.org/content/10.1... Congrats: Anna, @xinmingtu.bsky.social , @lxsasse.bsky.social

Excellent Info Graphic. Share everywhere!

Glad to see the grinding halt of NIH grant review and funding decisions covered in the @bostonglobe.com but why are we framing this as “mysterious” or question whether it was intentional??? FFS people. www.bostonglobe.com/2025/02/22/m...

NIH funding directly translates into jobs, new medicines and economic growth. Spread the word! Modify this graphic for your lab: drive.google.com/file/d/17h_t...

If you think this work is cool, do note that it was done by graduate students, PDs and staff in academic labs funded by federal tax payer dollars. Which means if no federal funding, a lot less of this kind of research. Use your voice to protect federally funded research which is under attack.

"These kinds of shocks are going to lead to a mass exodus … for minorities in particular.” For my latest @science.org story, I spoke with early career researchers who have been affected by the federal upheaval and are concerned about what it means for their future. www.science.org/content/arti...

YES. Keep speaking up keep calling your congresspeople keep working towards justice. We can fight this!!

Trump Administration Stalls Scientific Research Despite Court Ruling Using an arcane law, officials have effectively delayed funding from the National Institutes of Health, leaving medical studies in jeopardy.

New survey data shows 1 in 3 Seattle-area women ages 18-35 have taken medication for depression or anxiety in the past 12 months, writes FYI Guy.

Congratulations! 🥳🎉 This is so well-deserved! I'm truly honored to have you as part of my ISCB Award alumni.😊

Congratulations to Prof. Fabian Theis on winning the ISCB Innovator Award! 🏆 💡Theis is honored for his pioneering research in #ComputationalBiology. 👉More in our news: t1p.de/u8olc @fabiantheis.bsky.social @iscb.bsky.social #AI #MachineLearning #ISCBInnovatorAward #CellResearch

📣Meet our amazing @HiTSeq Keynotes speakers at the #ISMB2024 conference on July 12-16 in Montréal, Canada! Bringing the most novel statistical and computational methods for medicine and cell evolution to you! Call for abstracts is already open! iscb.org/ismb2024/home #ISCB

#UWAllen - www.geekwire.com/2025/overlan...

In case you were wondering how the Trump admin was still freezing NIH funds, despite court orders, this is how. www.nature.com/articles/d41...

Incredibly grateful and honored to receive the 2025 Overton Prize ♥️ Surreal to follow the steps of my science heroes🙏 Truly, credit goes to my amazing students, collaborators and mentors who make research so inspiring! Also underscores the value of open academic environment that make this possible

Scientists are now organizing events, called Stand Up for Science, on 7 March in Washington, D.C., and state capitals. So far, they have attracted more than 100 volunteers from some 30 states who are hoping to rally support for research as a public good. scim.ag/4328LAD

And here it is: "The MNG meeting scheduled for February 20-21, 2025, will be rescheduled for a later date, yet to be determined. I have disabled your access to this meeting in IAR." @jeremymberg.bsky.social @vscooper.micropopbio.org @metabodave.bsky.social

CRA statement about NSF firings cra.org/cuts-to-nsf-...

"I don't know what NSF is going to be now, but it's not more efficient. It's just a mess." My story on today's firings and their impact. www.npr.org/2025/02/18/n...

I am deeply honored to be named a Sloan Fellow this year. Thank you to my students, collaborators, and colleagues for making all of our work in @socialfutureslab.bsky.social possible. And thank you to the Sloan Foundation for your support of science and early career scientists in these times.

NEW: A letter from an anonymous federal worker. Please read and share: www.muellershewrote.com/p/letter-fro...

Firings are happening right now at the National Science Foundation. Essential staff are being cut. This isn’t about the budget. If it was, they’d be going after the military (17%) or state appropriations (38%). NSF is 0.7% of the federal budget. All federal employees make up only 4% of the budget.

From a friend at NSF: "We need lots of public support and outcries."

#News: FDA cuts hit AI division, even as Trump invests in the technology

Some of the positions of folks at NIH who were terminated (mostly by virtue of timing) At least 1 institute deputy director At least 1 institute director of extramural activities At least 1 program officer (and I am sure many more) At least 1 SRO (and I am sure many more) 1/2

Indian Health Services lost 850 employees today as part of the 5200 people HHS let go. The US government owes Native people access to good healthcare. Today our country reneged on our promises to them once again.

‘Open source will win’: Allen Institute for AI CEO Ali Farhadi on the new era of artificial intelligence https://www.geekwire.com/2025/open-source-will-win-allen-institute-for-ai-ceo-ali-farhadi-on-the-new-era-of-artificial-intelligence/

Brief overview of the catastrophic impact this administration’s layoffs are having on Tribal Nations —to tribal colleges, tribal public health programs, and tribal fire fighting, all which are being amplified with mass layoffs of federal employees the last few days ictnews.org/news/life-or...

It’s been buried in all the news today, but every scientist in the US should pay attention to this: Mike Lauer went out on a limb for us all, sending out a memo saying institutes should start awarding grants. And it looks like Trump/Musk fired him for that. 🧪

It's time to start a thread on higher ed budget cuts announced due to actual and potential cuts to federal funding. Northwestern is placing additional scrutiny on all spending and trying to cut non-personnel spending by 10% this year.

‘Wrecking ball’: RFK Jr. moves to fire thousands of health agency employees | Science | AAAS brought to you by @science.org www.science.org/content/arti...

Truly don't know how anyone is shocked by what Elon/Trump are doing and that they're ignoring court orders. It was all in Project 2025. They said they'd do it. In interviews. On social media. In investigative reports. It was all right there.

Said “yes” to a last minute urgent request from an SRO to review grants. All gratitude to the NIH staff who’ve kept going, doing their jobs with due diligence in the middle of the chaos. Thank you!

Today, along with 2,000 other NIH employees, I had to clear out my office 😭 It was truly the honor of my life to work with such incredibly passionate people focused on improving human health. I’ve never experienced a more positive culture where *everyone* cared about their job and serving others.

The NIH's greatest strength has always been its people... which is why it hurts so much to see so many cast aside. I did both my PhD and fellowship here, and l've seen how passion for discovery leads to breakthroughs and lives saved. #IDSky #Science

Our scientific ecosystem protects and improves lives across all communities, every day. Dismantling it for ideology will harm us all.

I maxed out my credit card, emptied my savings account, and took out a loan to move from Alabama to Bethesda, MD. I don’t even qualify for unemployment since I’ve only worked at NIH for a month. I will be financially and medically devastated. Seeking suggestions for anywhere that’s hiring!!

President Donald Trump’s administration today moved to fire 5200 workers at the Department of Health and Human Services, using supervisors across the vast agency to warn probationary employees that they would soon receive termination notices. scim.ag/4jYmcYA

I mis-added earlier, here's corrected post: How many scientists and interior workers were fired today? Between news article estimates and social posts, I count over 10k: 5200 @ NIH 1200-2000 @ DOE 800 @ USDA 2,300 @ Dept. of Interior 1,300 @ CDC (I haven't heard any FDA, EPA, or NASA numbers)

This week our class had an awesome discussion on this review article discussing #transformers for #SingleCell. One of my favorite parts was discussing Figure 3 on current strategies for how to transform the counts to a format that can be used by transformer. 1/n 🧪🧬💻 www.nature.com/articles/s41...

A big loss and very bad sign for NIH, folks

Defying defiance to the laws. Good for NIH!

popular.info/p/breaking-n... Nice. Lets keep the fight going. Thanks to all the legal teams taking on this corrupt, inept and insane Musk administration.